Gene Dhaf_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0247 
Symbol 
ID7257212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp277667 
End bp279136 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content46% 
IMG OID643560165 
Producthypothetical protein 
Protein accessionYP_002456751 
Protein GI219666316 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0302693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCACGA ATACTTACGC AAGAAAAAAA GCTCTTCAAA ATGAAGACTG GTGGGCGGCC 
TGGCTAGGGC TATTTATCTT CGCATTAGGT TTAGGACCTT ACTTTGGGGC AGACCTGTTA
GGCTGGGTAA CCAAAGCAAG TGTATGGATC GAACCTGCAA AAGCTTTTGC TCCTGTATCC
AAGGCTACGG GCCTGAATGG TTTCACATCC TTATTAGTGA CTTTCTTATT CGTTTTAGCT
ATCACCACTG TTGCCGCTAA ATTTGTCGGC TCTAATCTAA AAAAATACGC CATTGGTTTT
TCAATTATTT TCTGGGTAAC CATGGGTTGC CTCATGTTAG GCAACATTGC TTATATCGGA
GCTACACCTG ATAAGACTGC TAGTTATGGC ATTGGCTGGT CTCTTGGTCT AGGCGAAATG
GGTTATATCA TCGCCATGGT AGTCGGTCTT ATTATTGGGA ACTTCTTTAT CAAACAAGCC
GACTTTTTAA AAGAAGCTGC AAAACCTGAA TTATTTATTA AAATCGGTAT CGTCGTTCTT
GGTGCCTCCA TTGCTATTAA AACTCTCGAT GCCTTTGGCC TGGCTACAAC AATCATCATC
CGGGGACTTT GTGCTGTTGT TGAAGCTTAC TTGATCTACT GGCCGGTAGT TTACCTTATC
GCTCGTAAAT TCTTCAAATT CACACCAGAA TGGGCAGCAC CTTTGGCATC CGGTATCTCC
ATCTGCGGTG TTTCTGCTGC TATCGCTACT GGTAGTGCTA TCCGTGCCCG TCCCGTTATT
CCTGTAATTC TCTCCGCTGT TATCATCGTT TTCGTTGCCC TCGAACTCTT GTTATTGCCT
TGGTTAGCAC AAGCTTTCTT GTTCAAGGAT CCCATGGTTG CCGGTGCTTG GATGGGTCTG
GCTGTTAAAT CCGACGGTGG CGCTATCGCC AGTGGTGCTA TCACCGACTC CTTGATCAGG
GGCCGTGCCT TAAGGGAACT GGGCATCAAC TGGGAAGAAG GCTGGATCTT GATGGTCGCT
ACCACCACGA AAGTCTTCAT CGACATCTTT ATCGGTGTAT GGGCCTTCAT TCTGGCTATT
ATCTGGTCCG TATTCCCCAT CGATAAAAAT GCCAGTGCAA ATCCTGGTGA AAGAAATAAA
GTCAGTGCCG TAGATATCTG GGATCGTTTC CCCAAATTCA TCATCGGTTT CGTACTGACT
TTCCTCATCC TGTTCTTAGT CGGTGTGAAT AATCCTGATG GCGTCAAGGC ATTAAGCACA
GGCGTTAATG AAGGCAATGC TTTCAGAACT ATCTTCTTTG GCTTATGTTT CTTCTCCATC
GGCTTAGTCA CTAACGTTCG TAAGCTCTGG GCAGAAGGAA TGGGACGTAT CGTTGCCATT
TATGGTATTG CTCTCTTCGG CTTCATTCTC TGGTTCGGAC TGTTCATCTC CTGGCTCTTC
TACCATGGAA TTACGCCTCC GACTGTTTAA
 
Protein sequence
MSTNTYARKK ALQNEDWWAA WLGLFIFALG LGPYFGADLL GWVTKASVWI EPAKAFAPVS 
KATGLNGFTS LLVTFLFVLA ITTVAAKFVG SNLKKYAIGF SIIFWVTMGC LMLGNIAYIG
ATPDKTASYG IGWSLGLGEM GYIIAMVVGL IIGNFFIKQA DFLKEAAKPE LFIKIGIVVL
GASIAIKTLD AFGLATTIII RGLCAVVEAY LIYWPVVYLI ARKFFKFTPE WAAPLASGIS
ICGVSAAIAT GSAIRARPVI PVILSAVIIV FVALELLLLP WLAQAFLFKD PMVAGAWMGL
AVKSDGGAIA SGAITDSLIR GRALRELGIN WEEGWILMVA TTTKVFIDIF IGVWAFILAI
IWSVFPIDKN ASANPGERNK VSAVDIWDRF PKFIIGFVLT FLILFLVGVN NPDGVKALST
GVNEGNAFRT IFFGLCFFSI GLVTNVRKLW AEGMGRIVAI YGIALFGFIL WFGLFISWLF
YHGITPPTV