Gene Dhaf_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0217 
SymbolrplT 
ID7257178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp236192 
End bp236554 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content46% 
IMG OID643560131 
Product50S ribosomal protein L20 
Protein accessionYP_002456721 
Protein GI219666286 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000274969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTG TAAAAAGAGG GGTAACGAAG CATCAACGTC ATAAAAAAGT ATTAAAGCTT 
GCTAAAGGGT TCCGTGGAGC AAAGAGCAAG CTCTACCGTC CGGCTAATGA GCAAGTCATG
AAGTCCTTGG CTTATGCCTA TGCTCACCGC AGAGATAAAA AAGGTGATTT CCGTAAATTA
TGGATCGCTC GTATCAATGC AGCTGCCCGT CTGAACGGAT TAAGCTACAG CCGGATGATG
AACGGCCTGA AAATAGCCGG AGTATCCGTC AACCGTAAAA TGTTGGCTGA TCTGGCTATC
AATGATGCAG CAGCTTTCAC CGAATTAGTC AATGTAGCGA AAGCTCAAGT GAGTGCGAAG
TAA
 
Protein sequence
MARVKRGVTK HQRHKKVLKL AKGFRGAKSK LYRPANEQVM KSLAYAYAHR RDKKGDFRKL 
WIARINAAAR LNGLSYSRMM NGLKIAGVSV NRKMLADLAI NDAAAFTELV NVAKAQVSAK