Gene Dhaf_0185 details

Gene Information

• Locus tag: Dhaf_0185
• Symbol: thrS
• ID: 7257146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 204102
• End bp: 206021
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643560099
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002456689
• Protein GI: 219666254
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000179764
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGTAA AGATTACTTT AAAAGACGGC TCCATTCGGG AGATCGAATC GGGTAAGAGT 
CTCATGGAAT TAGCGGCCTC TATCTCCAGG GGTCTGGCTA AAGCTGCTCT GGCCGGGAAA 
GTGAATGGAG AGGTTAAGGA CCTGTCCTAT GCTTTAACTC AGGATGCTGA GGTGGAGATT 
ATCACGGCGG ATTCTGAGGA AGGCCTGAAG ATTTTAAGGC ATTCCACTTC TCACCTGATG 
GCGGAAGCGG TGCGGAACCT CTTCCCGGGG ACCATCTTAG GGATTGGCCC CGCCATTGAC 
AATGGCTTCT ATTATGATTT TGATTCCGAG CATGTCTTTA CACCGGAGGA TCTGGAGAAG 
ATCGAAGCTG AGATGCGTCG ATTGGTCAAA GAAAATAAAC GCTACGAACG AAAAGAGATC 
TCCCGCAGCG ACGCTTTGCA GTATTTCTCT GCAGAGGGAG AAAAGTATAA GGTAGAGCTG 
ATCGAGGACT TGCCTGAAGA TGAAGTGATT TCCATGTACA CTCAAGGTGG CTTCACCGAT 
CTCTGTGCCG GTCCCCATAT TCCTTCCACA GGGGTAGTTA AAGCGTTTAA ACTCATGAAC 
CTGGCCGGGG CTTACTGGCG GGGCAGTGAA AAGAATAAGA TGCTCCAACG GATCTACGGA 
ACTGTTTGGG CCAAAAAAGA AGATCTGGAT GACTACCTCT TTAAGCTGGA AGAAGCCAAG 
CGCCGTGATC ACCGTAAACT GGGTGTGGAG CTGGATCTGT TCAGCCTCCA CGATGAAGGG 
CCTGGCTTTC CCTTCTTCCA TCCCAAAGGC ATGGTGCTGC GCAACCAACT GGAAGACTTC 
TGGCGCCAGG AGCATCGCAA GAGAGGCTAT CACGAAATCA AGACCCCCAT CATCCTCAGC 
CGCAACCTGT GGGAAAACTC CGGTCACTGG GATCATTATA AAGACAATAT GTACACTACC 
AAGATTGATG ATGAGGACTT CGCCGTCAAG CCCATGAACT GCCCAGGGGG CATGATTATG 
TATAAGCAGA AGCTGAGAAG CTATCGGGAT CTTCCTTTGA GAATGGGAGA ACTGGGCTTG 
GTTCATCGCC ATGAGTTATC CGGTGCTTTA AACGGACTCT TGCGGGTGCG CAACTTCACT 
CAGGATGACG CCCATATCTT TATGCTTCCC TCCCAAATCA AAGCTGAAAT CAGCGGCGTC 
ATCGACCTGG TGGACCGTTT CTATAAGGTC TTTGGCTTTG AGTATCATGT GGAGCTTTCC 
ACTCGTCCTG AAAACTCCAT GGGGGCCGAT GAGACGTGGG AGATGGCTAC CAATGCCCTG 
CAGGAAGCCC TGGAAGCCAA GGGAGTCAAC TATAAGATCA ACCCAGGAGA CGGTGCTTTC 
TACGGACCGA AAATCGACTT CCATCTCCGG GACTGCTTAG GCAGAACCTG GCAGTGCGGT 
ACCATACAAC TGGATTTTCA AATGCCTGAG AAGTTTGACC TCACCTATAT CGGTGAAGAT 
GGTCAAAAGC ATCGCCCGGT TATGATTCAC CGGGTGGTGT ACGGCAGCAT TGAGCGCTTC 
ATTGCTCTGC TCACAGAGCA TTATGCCGGT GCCTTCCCCA CCTGGCTGGC TCCTGTTCAG 
GTCCGGGTGC TGCCCATCAG CGAACGCCAC GAGGACTATG CTCAGGACAT CGTCCGCCGC 
TTAAACGACT TGGACATCCG GGCTGAAGTG GATGAACGCC GCGAGAAGAT CAGCTATAAG 
ATCCGGGAAG CCCAGACTCA CAAAATTCCC TTCGCTCTCG TGGTCGGTGA CCAGGAAGCG 
GAAACAGATA CTGTCGCTGT ACGGCGCTAT GGTCAGGCTA ACGCCGGTGA AAAACTTTCT 
GTAGCAGAAT TCATTGCTCT CATCCAGGAA GAAATCTGCA GCAAGAAGCA ATTAGTATAA 

 

Protein sequence

MMVKITLKDG SIREIESGKS LMELAASISR GLAKAALAGK VNGEVKDLSY ALTQDAEVEI 
ITADSEEGLK ILRHSTSHLM AEAVRNLFPG TILGIGPAID NGFYYDFDSE HVFTPEDLEK 
IEAEMRRLVK ENKRYERKEI SRSDALQYFS AEGEKYKVEL IEDLPEDEVI SMYTQGGFTD 
LCAGPHIPST GVVKAFKLMN LAGAYWRGSE KNKMLQRIYG TVWAKKEDLD DYLFKLEEAK 
RRDHRKLGVE LDLFSLHDEG PGFPFFHPKG MVLRNQLEDF WRQEHRKRGY HEIKTPIILS 
RNLWENSGHW DHYKDNMYTT KIDDEDFAVK PMNCPGGMIM YKQKLRSYRD LPLRMGELGL 
VHRHELSGAL NGLLRVRNFT QDDAHIFMLP SQIKAEISGV IDLVDRFYKV FGFEYHVELS 
TRPENSMGAD ETWEMATNAL QEALEAKGVN YKINPGDGAF YGPKIDFHLR DCLGRTWQCG 
TIQLDFQMPE KFDLTYIGED GQKHRPVMIH RVVYGSIERF IALLTEHYAG AFPTWLAPVQ 
VRVLPISERH EDYAQDIVRR LNDLDIRAEV DERREKISYK IREAQTHKIP FALVVGDQEA 
ETDTVAVRRY GQANAGEKLS VAEFIALIQE EICSKKQLV