| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0112 |
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| Symbol | |
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| ID | 7257061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 115807 |
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| End bp | 117990 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643560015 |
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| Product | ABC transporter related |
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| Protein accession | YP_002456617 |
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| Protein GI | 219666182 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAAAAA AGAAAATCGT CAAGGTTCCC ACCGTGCTGC AGATGGAGGC GGTAGAGTGC
GGAGCGGCAT CTCTGGCTAT GATTCTGGCT TATTACGGAA AGTATATCAC TCTGGAGGAA
TTAAGAATTG CCTGCGGGGT ATCCCGGGAT GGGAGTAAAG CCAGCAATCT TCTGAAAGCC
GCCAGGAATT ATGGCCTGGA AGCGAAGGGT TACCGAAAAG AACCGGAAGC CCTGCGCAGG
ATGCCCCTGC CTCTGGTCAT TCACTGGAAT TTCAGCCACT TCCTCGTTCT CGAGGGCTTC
CATAAAGGAA AAGCAGTCCT GAACGACCCG GCGGCAGGTA GGAGAACCGT TTCGGAGGAA
GAATTCAATC TGGCTTTTAC GGGTATTGTT CTTTCCTTTA CACCGACAAC TGAATTTCAA
AAGGACAGCA GAAAGCCTGG TTTGAGCCTG GCCTTAAGAA GAAGGCTTAA AGGCTCGGAG
CAGGCCCTGA TCTATATCAT TCTATTGGGT CTGGCCTTAG TCATTCCCGG CTTGATAATC
CCTGTGTTTT CCAGAGTATT TGTCGATGAT ATCCTGTTGG GCGGTCTCCA TTCCTGGGTG
TGGCCCTTGC TGCTGGGGAT GGGCATTACG GCAATGCTCA GGGGAGTTTT AACCTGGATG
CAGCAATATT ATTTGCTTAG ATTGGAGACG AAAATCGCCT TAGCCACCTC CGGTCAGTTT
CTGTGGCATA TTTTTCGGCT GCCCAGTGAA TTCTTTTCCC AGCGGGCGGC CGGTGAGCTT
ACGTCCAGGA TACAAAGCAA CGATAAGGTG GCGAAGCTCT TGTCAGGTAA ACTGGCCACT
ACGGCACTGA ATGTCCTCAT GATTATGTTT TACTTTACTT TAATGCTCAC CTATAGCTGG
ATTTTAGCCT TGGTAGGGTT GGCAATCGCT TTCATCAATG TAGGTTACTT GATTGCGGTT
TCGGCCCGGA GAGTCGATTT GAATCGCAGA TTACTTCAAG ATGAGGGGAA GCTGATTGGC
TCGAGTATGG CGGGTCTCCA AATTATCGAG ACTCTCAAAG CCACAGGCTC GGAAGCCAAC
TTCTTTGCCC AATGGTCGGG ATATCAGGCG AAATTGCTCA ATGCTGAACA GGAGCTGGGA
GTTTCTTCAC AGTTTTTATC CGTATTCCCC AGTTTTCTAA CCGGCATCAA TAACGCCCTT
GTCCTGGTGA TCGGCGGTTT TTTGATTCTC GATGGTCAAA TGACCATCGG CATGCTGGTA
GCTTTCCAAA GCCTGATGAG CAGCTTCATG ACGCCGGTCA CCGGACTGGT GGGTCTCGGC
GCTGAGCTTC AGGAAATGAC AGGTGAGATG AATCGTTTAG ATGATGTATT AAACTATCCA
CTCGGTCGGG ACCAAGGGGA CCAGGGGGGT CGGGGGGAGC AGGAGGGTTT AGGGGGGACA
GCCGAACCCC CGGCAGGGCA GAAGCTATCC GGCTACGTGG AACTCAGGAA CATTACCTTT
GGCTATAGCA TCTTGGAACC GCCATTGATC GAGGATTTCA GCCTAAGCCT GAGGCCGGGG
TCACGGGTGG CGCTCGTAGG CGGCTCCGGC AGCGGAAAAT CTACCATCGC CAAAATCATC
GCCGGCATCC ACCATCCCTG GTCAGGTGAA ATTCTCTTTG ATGGGCAACC CCGCGCCTCT
TTCACCAAGG AAGTGCTCAG CAATTCCCTA GCTATGGTGG ATCAGGAAAT ATGTATGCTT
CAAGGGACGG TCAAAGAGAA TATTACCCTC TGGGACGGAA CCATTTCGGA GTTCGGGATG
ATCCGGGCTG CCAGGGATGC CTGTATCCAT GATGAGATTA CCGCCCGACC GGGGGGCTAT
GAACAAATGG TGGAGGAAGG CGGTAAAAAT TATAGCGGCG GTCAGAGGCA AAGGCTGGAG
ATCGCCAGAG CTTTAGCCCA AAACCCGGTC ATTCTGATTA TGGATGAAGC CACCAGTGCA
CTTGATCCTA TAACAGAGAA GAATGTGGAT GAATATATTC GTTATCGGGG GTGTACCTGC
ATCATTGTTG CCCATCGCCT CAGTACCATA CGGGATTGTG ACGAGATCAT TGTACTGGAA
AAGGGGAAGA TTATTGAGCG GGGAACCCAT GGGTCCCTGT ATGAGCGTGC GGGAACTTAT
GCCAAACTGA TTGCCACAGG TTGA
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| Protein sequence | MVKKKIVKVP TVLQMEAVEC GAASLAMILA YYGKYITLEE LRIACGVSRD GSKASNLLKA
ARNYGLEAKG YRKEPEALRR MPLPLVIHWN FSHFLVLEGF HKGKAVLNDP AAGRRTVSEE
EFNLAFTGIV LSFTPTTEFQ KDSRKPGLSL ALRRRLKGSE QALIYIILLG LALVIPGLII
PVFSRVFVDD ILLGGLHSWV WPLLLGMGIT AMLRGVLTWM QQYYLLRLET KIALATSGQF
LWHIFRLPSE FFSQRAAGEL TSRIQSNDKV AKLLSGKLAT TALNVLMIMF YFTLMLTYSW
ILALVGLAIA FINVGYLIAV SARRVDLNRR LLQDEGKLIG SSMAGLQIIE TLKATGSEAN
FFAQWSGYQA KLLNAEQELG VSSQFLSVFP SFLTGINNAL VLVIGGFLIL DGQMTIGMLV
AFQSLMSSFM TPVTGLVGLG AELQEMTGEM NRLDDVLNYP LGRDQGDQGG RGEQEGLGGT
AEPPAGQKLS GYVELRNITF GYSILEPPLI EDFSLSLRPG SRVALVGGSG SGKSTIAKII
AGIHHPWSGE ILFDGQPRAS FTKEVLSNSL AMVDQEICML QGTVKENITL WDGTISEFGM
IRAARDACIH DEITARPGGY EQMVEEGGKN YSGGQRQRLE IARALAQNPV ILIMDEATSA
LDPITEKNVD EYIRYRGCTC IIVAHRLSTI RDCDEIIVLE KGKIIERGTH GSLYERAGTY
AKLIATG
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