| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0100 |
|---|
| Symbol | |
|---|
| ID | 7257049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 103081 |
|---|
| End bp | 103767 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643560003 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002456605 |
|---|
| Protein GI | 219666170 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTC ATTGGGAAAA ATCACAAGAA ACTGAAGAGC AGATACATGT GCTCATCGTG
GACAGCCACC GGCCCTTTGC AGAAGGGACC AGGGCGTTGC TGTCTTCTGA ACCGCGCATA
GTGACCATCG GAATTGCCGG GGATGAAGAC TCGTGTCTGA ATTTTCTCCG CCATTCTGTG
CCGGATGTTG TTTTATTGGA TTTTTATCTT CGGGATATCA GCGGGCTGGA CTTGATGGAT
AAGATAAAAG CGGCCCACCC CGCCCTAAAG GTTATTCTGA TGGTGGAACA AAGTCAGGAG
GGTTATGTTC TGGCGGCAAG CCGCAAAGGG GCCGAAGGGC TGTTGTTGAA AACCTGTGCC
GTCGAGGAAA TGATACAAGC TGTCTTAAGC GTGTCTAAAG GGGGCGTATA TTATTCTCCA
AGCCCGCTGG CGTTTTCCCA GGTTGAAATA GATTTCCATG ATTTGCATTT CCCCGCGAAG
CCTGCCGAAG TCCTTAAAAG GCTGTTGACA CCCAGAGAAA AGGAAATTAT GAGCCTTCTG
ACCAAGCCTC TCCATAACAG AGAGATTGCC GCAGCCTTAG GAATCACCGC CCGGGCGGCT
CATCTTCAGG TGAAGATTAT CCTTCTCAAA TTTGGGATTA AAACACGTCT GGAAGCTGTC
TTATCCTGGG CATATGTTGA CGAGTAA
|
|---|
| Protein sequence | MSVHWEKSQE TEEQIHVLIV DSHRPFAEGT RALLSSEPRI VTIGIAGDED SCLNFLRHSV
PDVVLLDFYL RDISGLDLMD KIKAAHPALK VILMVEQSQE GYVLAASRKG AEGLLLKTCA
VEEMIQAVLS VSKGGVYYSP SPLAFSQVEI DFHDLHFPAK PAEVLKRLLT PREKEIMSLL
TKPLHNREIA AALGITARAA HLQVKIILLK FGIKTRLEAV LSWAYVDE
|
|---|
| |