Gene Dhaf_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0086 
Symbol 
ID7257035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp89105 
End bp90019 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID643559989 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_002456591 
Protein GI219666156 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATATA TCAGTGTGCA GCAAGCAGCT GAACAATGGG GGCTTTCAGA TCGACGTGTG 
CGGTTGCTCT GCGAACAGGG AAAAATTGAA GGTGTTATTC GGGAAGGCCG TTCATACAGA
ATACCTGCTG ATTCTGTCAA GCCGCTTGAT GGCCGCATTT TGCGCGGCAA AATTATTCCG
CAAGAATACA CCACTCTATT CGCACGGGTT GATGCACTCA AATCACAGAT TAGCAAGCGT
CGTCCTTTCA CCCAAGGAGA ATTAAAGCGT TTGCAGGAGG AATTCCTTGT AGAGTTCACA
TACAACTCCA ACGCTATTGA AGGCAATACC CTTACACTCC GGGAAACCGC CCTGGTGTTG
GAAGGCGTTA CGATAGACCA AAAGCCGCTC AAAGATCATC TGGAGGCTGT GGGTCACCGG
GATGCGTTTT TATATATCCA ACGGCTCGTT ACAGAAAAGG CGCCGGTTTC TGAAAAGATT
ATTAAGGACA TCCACTCACT GGTGCTGATG GACAGACCTG ACGACAAAGG CGTGTACCGC
AGAATCCCTG TCACGATCAC GGGCGCCTAC CATGAGCCAT CCCAACCCTA TCGGATTCCA
GTACAGATGG AACAGCTTAT CGCTGCGCAA AAAGAAGAAA AGCGCCATCC CCTAGAGAAT
GCCGCTGTAT TTCATTTAAA GTTTGAGGGT ATTCACCCTT TTATTGATGG TAATGGACGC
ACTGGACGGT TGCTGCTTAA TCTTATGCTG ATGCAGCAGG GCTATCCGCC TATTGACGTA
AAGTTTGCAG ATAGGAAGCG GTACTATGCC TGCTTCGATA GCTATTATAA GGACAAGACT
GCCGCACCGA TGGTGGAAAT GGTGGCCGGG TATTTAGAGG AACGATTGAA ACGATACCTG
GATATTCTTT TATGA
 
Protein sequence
MEYISVQQAA EQWGLSDRRV RLLCEQGKIE GVIREGRSYR IPADSVKPLD GRILRGKIIP 
QEYTTLFARV DALKSQISKR RPFTQGELKR LQEEFLVEFT YNSNAIEGNT LTLRETALVL
EGVTIDQKPL KDHLEAVGHR DAFLYIQRLV TEKAPVSEKI IKDIHSLVLM DRPDDKGVYR
RIPVTITGAY HEPSQPYRIP VQMEQLIAAQ KEEKRHPLEN AAVFHLKFEG IHPFIDGNGR
TGRLLLNLML MQQGYPPIDV KFADRKRYYA CFDSYYKDKT AAPMVEMVAG YLEERLKRYL
DILL