Gene Dhaf_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0060 
Symbol 
ID7257009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp60785 
End bp62203 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content53% 
IMG OID643559963 
ProductOrn/Lys/Arg decarboxylase major region 
Protein accessionYP_002456565 
Protein GI219666130 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.845817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGAATT TAGGTCATAA ATTGCTTCAG TATGAAGCTC AGAAGCTGAT TTCCTTTCAT 
ACTCCAGGAC ATAAAGGAAA AGCGGAATTT TTTACGGATT TGCATTTTCC CGATCAGGAT
CTTACAGAAC TGCCGGGCTT GGATATGCTG CACTCCCCCG CGGGGGTGAT TGCTCAGGCT
CAGGCCCGGG CTGCCGCTGT GTATCAAAGT GATGCCAGCT TTTATCTGAT CAATGGGGCA
ACGGTGGGCA ACCAAGGGAT GTTCATGGCT TTGGCCGGTA CCGGGAAGCG GGGAAAGGAC
CTGCAGCTGC CTAAGGTTCT GGTGGAGAGG CAGTCCCACC GTTCTGTGTT TTCGGCTTTG
GTGTTATCGG GATGTGAACC GGAATATATC CCCAGTGTGG TTCATCCGGA GTTCGGGCTG
CCCTTGGGAC TGAAATCCAT TGCTGAAGTG GATTTGGGTG AATTTCTGGG GGTTCATCTG
ACCTATCCCG GCTATTATGG GACCTTGCCG GATTTGGCAA TGATCGCGGC CCAAAGGGAT
CGCCAGGCAG TTCAAGTGAG CATTTTGGTG GATCAGGCTC ATGGTTCCCA TTATTTGAGC
CCGCTCTTCC CCAAAGGAGC CCTGGCTTAT GGGGCGGATC TGGTGCTGTG CAGCACCCAT
AAGACCTTAA GCGCCTTGAC TCAGGCGGCG ATGCTTCATG TACAGGGCTC GCGGATTCCC
TTGTCCGCTC TTAAGGAGGC TCTTGAGCTG CTGCAATCTT CCAGCCCCAG TTATCTCCTG
ATGGCTTCTT TGGAAAGGGC TGTCGAACAT GCTTTGGAAA GCAGGCGCTG GGAGCTGCTT
CATGAAGCGG TGCAGGAACT GCATCACCGT GTGGGCGGAT CCTTGCGGAT CTTAAACCCT
CAGGATGTAG GGACTTACGG GATTGCTGGA CTGGATTGGA CGAAGATCAT GATCAATACC
CAAAGACTGG GGGTTGCGGC TCCCCGTTGT GTAGAGCATT TGCGTAAGAG TTATGGAATT
GACCCTGAAT TATGGGATGA CAAAAATATT TTATTTCTGT TAGGGATTGG CAATACTCCC
GAAGAGGTAG AGATCCTTAC CAAGGGTTTA TTAAGCTTAG CAAGCCTGAA CAAAGATGTC
GTGGCATCTC CCGAGGAGAT GGTTTTCGAG ATTCCTCTGC CGCCGGTCAG ACTCACTCCC
CGCCAAGCCT ATTTTGCCCG GAAGCGCAAG ATCCCCCTTG CGGAGAGTGT GGGGCACATC
GTGGGTGAGA GCATTTCCCC CTATCCCCCA GGCATTCCTT GGATTGTGAT GGGAGAAGAG
ATGACTCCTG AGATCTTAGA GCTTCTGACC CGGCATAAGG GGCGCTGGCA AGGCTGGGAG
GATGCAGGCC AAGGAGTCTG GATCATCGAG GAGGTTTAA
 
Protein sequence
MLNLGHKLLQ YEAQKLISFH TPGHKGKAEF FTDLHFPDQD LTELPGLDML HSPAGVIAQA 
QARAAAVYQS DASFYLINGA TVGNQGMFMA LAGTGKRGKD LQLPKVLVER QSHRSVFSAL
VLSGCEPEYI PSVVHPEFGL PLGLKSIAEV DLGEFLGVHL TYPGYYGTLP DLAMIAAQRD
RQAVQVSILV DQAHGSHYLS PLFPKGALAY GADLVLCSTH KTLSALTQAA MLHVQGSRIP
LSALKEALEL LQSSSPSYLL MASLERAVEH ALESRRWELL HEAVQELHHR VGGSLRILNP
QDVGTYGIAG LDWTKIMINT QRLGVAAPRC VEHLRKSYGI DPELWDDKNI LFLLGIGNTP
EEVEILTKGL LSLASLNKDV VASPEEMVFE IPLPPVRLTP RQAYFARKRK IPLAESVGHI
VGESISPYPP GIPWIVMGEE MTPEILELLT RHKGRWQGWE DAGQGVWIIE EV