Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0060 |
Symbol | |
ID | 7257009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 60785 |
End bp | 62203 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643559963 |
Product | Orn/Lys/Arg decarboxylase major region |
Protein accession | YP_002456565 |
Protein GI | 219666130 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.845817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGAATT TAGGTCATAA ATTGCTTCAG TATGAAGCTC AGAAGCTGAT TTCCTTTCAT ACTCCAGGAC ATAAAGGAAA AGCGGAATTT TTTACGGATT TGCATTTTCC CGATCAGGAT CTTACAGAAC TGCCGGGCTT GGATATGCTG CACTCCCCCG CGGGGGTGAT TGCTCAGGCT CAGGCCCGGG CTGCCGCTGT GTATCAAAGT GATGCCAGCT TTTATCTGAT CAATGGGGCA ACGGTGGGCA ACCAAGGGAT GTTCATGGCT TTGGCCGGTA CCGGGAAGCG GGGAAAGGAC CTGCAGCTGC CTAAGGTTCT GGTGGAGAGG CAGTCCCACC GTTCTGTGTT TTCGGCTTTG GTGTTATCGG GATGTGAACC GGAATATATC CCCAGTGTGG TTCATCCGGA GTTCGGGCTG CCCTTGGGAC TGAAATCCAT TGCTGAAGTG GATTTGGGTG AATTTCTGGG GGTTCATCTG ACCTATCCCG GCTATTATGG GACCTTGCCG GATTTGGCAA TGATCGCGGC CCAAAGGGAT CGCCAGGCAG TTCAAGTGAG CATTTTGGTG GATCAGGCTC ATGGTTCCCA TTATTTGAGC CCGCTCTTCC CCAAAGGAGC CCTGGCTTAT GGGGCGGATC TGGTGCTGTG CAGCACCCAT AAGACCTTAA GCGCCTTGAC TCAGGCGGCG ATGCTTCATG TACAGGGCTC GCGGATTCCC TTGTCCGCTC TTAAGGAGGC TCTTGAGCTG CTGCAATCTT CCAGCCCCAG TTATCTCCTG ATGGCTTCTT TGGAAAGGGC TGTCGAACAT GCTTTGGAAA GCAGGCGCTG GGAGCTGCTT CATGAAGCGG TGCAGGAACT GCATCACCGT GTGGGCGGAT CCTTGCGGAT CTTAAACCCT CAGGATGTAG GGACTTACGG GATTGCTGGA CTGGATTGGA CGAAGATCAT GATCAATACC CAAAGACTGG GGGTTGCGGC TCCCCGTTGT GTAGAGCATT TGCGTAAGAG TTATGGAATT GACCCTGAAT TATGGGATGA CAAAAATATT TTATTTCTGT TAGGGATTGG CAATACTCCC GAAGAGGTAG AGATCCTTAC CAAGGGTTTA TTAAGCTTAG CAAGCCTGAA CAAAGATGTC GTGGCATCTC CCGAGGAGAT GGTTTTCGAG ATTCCTCTGC CGCCGGTCAG ACTCACTCCC CGCCAAGCCT ATTTTGCCCG GAAGCGCAAG ATCCCCCTTG CGGAGAGTGT GGGGCACATC GTGGGTGAGA GCATTTCCCC CTATCCCCCA GGCATTCCTT GGATTGTGAT GGGAGAAGAG ATGACTCCTG AGATCTTAGA GCTTCTGACC CGGCATAAGG GGCGCTGGCA AGGCTGGGAG GATGCAGGCC AAGGAGTCTG GATCATCGAG GAGGTTTAA
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Protein sequence | MLNLGHKLLQ YEAQKLISFH TPGHKGKAEF FTDLHFPDQD LTELPGLDML HSPAGVIAQA QARAAAVYQS DASFYLINGA TVGNQGMFMA LAGTGKRGKD LQLPKVLVER QSHRSVFSAL VLSGCEPEYI PSVVHPEFGL PLGLKSIAEV DLGEFLGVHL TYPGYYGTLP DLAMIAAQRD RQAVQVSILV DQAHGSHYLS PLFPKGALAY GADLVLCSTH KTLSALTQAA MLHVQGSRIP LSALKEALEL LQSSSPSYLL MASLERAVEH ALESRRWELL HEAVQELHHR VGGSLRILNP QDVGTYGIAG LDWTKIMINT QRLGVAAPRC VEHLRKSYGI DPELWDDKNI LFLLGIGNTP EEVEILTKGL LSLASLNKDV VASPEEMVFE IPLPPVRLTP RQAYFARKRK IPLAESVGHI VGESISPYPP GIPWIVMGEE MTPEILELLT RHKGRWQGWE DAGQGVWIIE EV
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