| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0017 |
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| Symbol | |
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| ID | 7256964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 16151 |
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| End bp | 17281 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643559919 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002456522 |
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| Protein GI | 219666087 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.156955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCAC TGATAGTACA CTATGTGGAA TTAAATTTCT TTGCGATGAC CATCTTATGC
GTAATATTTT TGAACATGCG TCGCCCAGAC CGTCAGTATT CACTGGATCA GAAGCTTTTT
TTCCTTTTGA TTTCCGCCAA TATTCTTCTT TTGCTTTTGG ACTCGATGCT CTGGATTTTA
GATGGTAAGC CAGGCAGCCT GGCGAGAACG CTGAGTATAG CATCAATCGT AGCCTATAAT
ACCTTAAATC CGGTCATTTG TATGATCTGG TACTATTATG TGGATTTTTA TATCCACAGC
AGCAAAGAGC GTTTGACCAA AGTATTATTC CCCATACTCC TTCCAGTATT AATTAACTTG
GTCTTATCCG TTGCCAGTGT TTTTACGAAT ATTTACTTTA TCTTTGACGA GAACAATGTC
TATCACCGGG GTCGTTTCAT CTTTCTTCTG TTAGGAATAT GCCTCTATAT GATCATTTAC
ACCAGCGCGT TCTTAATTAG GAACAGGAAA AAAATCGCTG GAAAGGAGTA TGCCTACCTG
CTCTTTTTTG CCATTCCCCC CATGGTAGGC GGGATTATCC AGTTCATGTT TCCTGGAGCA
GTCATGATTT GGATAGCTTC AACCTTGTCT ATCTTGATTA TCTTTATCAA CATTCAAAAA
GATCAGCTGA ATACGGATTA TCTGACAGGT GTTTATAACC GGAGATATCT TGACAATTAC
CTTCAGGAGA AGATGAAAAA CAGGCGTCAT CATCTGATTG CCGGTATCAT GATTGATATC
GATTCTTTTA AAACCATCAA TGATTCCTAT GGGCATGACA ATGGCGACCA GGCCTTAAAA
TATACAGCTC AAATGCTTAG AAAAACTTTC CGAAAAACGG ATTTTATCGC CAGATACGGT
GGAGATGAGT TTGTTATCGT CATGGAAATC GATGACCGGG CGGAGCTTAT GGCAATGGTA
CAGAGGCTTA AGGAAAAAGT GTCTCAGTTT AATCTGGAAA AAATAACTCC CTATGAACTC
CGCCTCAGCA TCGGCTATGA TTGTTATACA AAGGAACCGG ACATGTCAAC CATGGCCTTT
CTGAAAAGGA TAGATCAATT GATGTATATG GATAAACAAA AAAATGCCTA A
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| Protein sequence | MMPLIVHYVE LNFFAMTILC VIFLNMRRPD RQYSLDQKLF FLLISANILL LLLDSMLWIL
DGKPGSLART LSIASIVAYN TLNPVICMIW YYYVDFYIHS SKERLTKVLF PILLPVLINL
VLSVASVFTN IYFIFDENNV YHRGRFIFLL LGICLYMIIY TSAFLIRNRK KIAGKEYAYL
LFFAIPPMVG GIIQFMFPGA VMIWIASTLS ILIIFINIQK DQLNTDYLTG VYNRRYLDNY
LQEKMKNRRH HLIAGIMIDI DSFKTINDSY GHDNGDQALK YTAQMLRKTF RKTDFIARYG
GDEFVIVMEI DDRAELMAMV QRLKEKVSQF NLEKITPYEL RLSIGYDCYT KEPDMSTMAF
LKRIDQLMYM DKQKNA
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