Gene Dhaf_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0009 
Symbol 
ID7256955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp11110 
End bp11556 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID643559911 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002456515 
Protein GI219666080 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000000143091 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATC AGGACTATAT GCGCTTAGCT CTTGAAGAAG CTGAAATTGC CTTTGCCCAG 
GGAGAAGTTC CCATCGGGGC AGTGGTGGTG CATAAGGGAG AAATCATTGC CAGAGCTCAT 
AATGAAAAAG AGCTGAGGCA GGACCCTACA GCCCATGCTG AAGTTTTGGC TGTGCAGCGG 
GCAACTCAAG CCTTGGGAAT TTGGCGTCTT TCTGAAGCCA CTCTCTATGT GACTCTGGAA 
CCTTGCCCGA TGTGTGCCGG TAGTTTGGTT CAGGCCCGCT TAAAAACCCT TGTTTTTGGA 
GCGGCTGATC TTAAAGGCGG AGCAGTAGGT TCCGTGACCA ATGTACTGGA TGTGAACCGC 
TGGAATCACC GTGTGGAGGT TGTGGCGGGG ATATTGGAAG AAGAGTGTGC CCAGATTCTG 
AAGGATTTTT TTCGGAAGCT AAGGTAA
 
Protein sequence
MNHQDYMRLA LEEAEIAFAQ GEVPIGAVVV HKGEIIARAH NEKELRQDPT AHAEVLAVQR 
ATQALGIWRL SEATLYVTLE PCPMCAGSLV QARLKTLVFG AADLKGGAVG SVTNVLDVNR 
WNHRVEVVAG ILEEECAQIL KDFFRKLR