Gene Dhaf_0005 details

Gene Information

• Locus tag: Dhaf_0005
• ID: 7256949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 4326
• End bp: 6260
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 643559905
• Product: DNA gyrase, B subunit
• Protein accession: YP_002456511
• Protein GI: 219666076
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00336478
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAAGAAA AAGCCGAAAT CAAGGAGACT ATTCCAACCA ATGATTATAA TGCAGGGCAG 
ATTGAGGTCC TTGAAGGTTT AGAAGCGGTC AGAAAAAGAC CGGGGATGTA TATCGGTTCC 
ACAAGTCTGC GCGGTTTGCA TCATTTGGTC TATGAAATCG TGGATAATAG TATCGACGAG 
GCTTTGGCCG GTTACTGCGA TACCATTGAA GTCACGATCC ATAAAGATAA CAGCATCTCC 
GTGGTGGATA ATGGCCGGGG GATTCCGGTG GATATTCATC CTAAATTAGG CAAGCCGGCT 
GTTGAGGTGG CTTTAACGGT GCTCCATGCC GGAGGAAAAT TCAGCGGCAG CGCTTATAAA 
GTATCCGGGG GACTCCACGG CGTGGGGATG AGCGTGGTCA ATGCTTTATC CACCTGGCTC 
CATGTGGAGG TCAGGAAAGA CGGGAATATT TATCATCAGG AGTTTATGCG GGGTAAAACC 
AAGACAGAAC TGGCGGTGAT TGGTCAGGTG GATCCCAATC AGACCGGAAC CACCATTACC 
TTTTCTCCCG ATCCGGAAAT TTTCGAGGAT ACCGTGTTCC TCTTTGATAC TTTAGCTCAC 
CGTCTTCGTG AACTTTCTTT CTTGAATAAA AAGGTATCGA TTACCTTGAT CGATGCCAGA 
GAAGACAAGA AAGAAGTTTA CTATCATACC GGCGGCATCT ACGATTTTGT CAAGTATATC 
AACCGTTCCA AAGAATCTCT TCATCCTGAA CCCATTTACT TTGAAGCAGA AAAGGATGGG 
GTCCAGGTTG AAGTATCCAT GCAATATAAT GACGGCTATG TGGAAAATCT TTTTTCTTAT 
GCCAATAATA TTCATACCCA TGAAGGGGGC ACCCACGAAT CCGGCTTTAA AGCGGCTCTG 
ACCCGGGTGG CCAATGATTA TGCCCGGAAA AACAATATCC TGAAAGCCAA CGAAGCCAAC 
CTATCGGGAG AAGATATCCG GGAAGGTTTG ACCGCCGTGA TCTCGGTAAA AGTTCCTGAA 
CCCCAGTTCG AAGGTCAAAC CAAGACCAAG TTGGGGAATT CGGAAATTCG TTCGATTGTG 
GATTCCATCA CCGGAGAAGG CTTATCGGCG TTTTTTGAGG AAAACCCCGC CATAGGCAAG 
AAAGTCATTG AAAAATCCAT TCAGGCTTCC CGGGCCCGGG AAGCAGCCCG CAAAGCCAGG 
GAATTAACCC GGCGCAAAAG CGCTCTGGAA GTCAGCGCTT TGCCGGGGAA ATTAGCCGAT 
TGCTCCTGGA AAGAAGCAGA GCTTTGTGAG ATGTATATCG TGGAGGGTGA CAGTGCGGGA 
GGTTCGGCCA AGCAAGGCCG GGATCGTCGT TTTCAGGCTA TTCTGCCCCT GCGCGGCAAA 
ATTCTCAATG TGGAAAAAGC CCGTTTGGAT CGGATTTTAG GCAATGCTGA GATCAGAGCC 
ATGATCACAG CCATGGGTAC GGGGATTTCC GAGGATTTTG ATATTGAAAA AGCCCGCTAT 
CATAAATTAG TGATCATGAC CGATGCCGAT GTGGATGGTG CTCATATCCG GATTTTGCTC 
CTGACCTTCT TCTTCCGCTA TATGAAGCCT TTGCTTGAGA ACAATTATGT CTATATTGCC 
CAGCCCCCTC TGTTTAAAGT GAAGAAGGGG AAGGATATCC ATTATGTCTA CAGCAATGAA 
GAGTTAGCCA AGCTGCAGGA TGAGATCGGC CGCGATCGGG TGGAAATTCA GCGCTACAAA 
GGTTTAGGGG AAATGAATGC GGAACAGCTT TGGGAAACCA CTATGGATCC GGCCAAAAGA 
ACTATTCTGC AGGTGACCAT GGAAGATGCC ATTAAAGCGG ACGAGCTCTT TACCATTCTC 
ATGGGTGATG TGGTGGAACC AAGGCGTGAA TTCATCCAGG ATAATGCACA ATATGTCCGT 
AATCTGGACG TCTAA 

 

Protein sequence

MQEKAEIKET IPTNDYNAGQ IEVLEGLEAV RKRPGMYIGS TSLRGLHHLV YEIVDNSIDE 
ALAGYCDTIE VTIHKDNSIS VVDNGRGIPV DIHPKLGKPA VEVALTVLHA GGKFSGSAYK 
VSGGLHGVGM SVVNALSTWL HVEVRKDGNI YHQEFMRGKT KTELAVIGQV DPNQTGTTIT 
FSPDPEIFED TVFLFDTLAH RLRELSFLNK KVSITLIDAR EDKKEVYYHT GGIYDFVKYI 
NRSKESLHPE PIYFEAEKDG VQVEVSMQYN DGYVENLFSY ANNIHTHEGG THESGFKAAL 
TRVANDYARK NNILKANEAN LSGEDIREGL TAVISVKVPE PQFEGQTKTK LGNSEIRSIV 
DSITGEGLSA FFEENPAIGK KVIEKSIQAS RAREAARKAR ELTRRKSALE VSALPGKLAD 
CSWKEAELCE MYIVEGDSAG GSAKQGRDRR FQAILPLRGK ILNVEKARLD RILGNAEIRA 
MITAMGTGIS EDFDIEKARY HKLVIMTDAD VDGAHIRILL LTFFFRYMKP LLENNYVYIA 
QPPLFKVKKG KDIHYVYSNE ELAKLQDEIG RDRVEIQRYK GLGEMNAEQL WETTMDPAKR 
TILQVTMEDA IKADELFTIL MGDVVEPRRE FIQDNAQYVR NLDV