Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0002 |
Symbol | |
ID | 7256946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1698 |
End bp | 2801 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643559902 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_002456508 |
Protein GI | 219666073 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.150547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT ATTGCTCCAA GGACTCCCTG ATTACGGGAG TGAATACTGT CCAAAAAGCA GTATCAAATA AAAACACCTT GCCTGTTCTG CAAGGAATTA TGATTAGAGC TGAAGGACAA TCCTTGATCT TCGAAGCCAC GGATTTAGAA ATAGGGATCC GCTGCGTCGT TCCGGCTCAG GTAGAAAAAG AGGGAGTTGT GGTTCTTCCT TCCCGGCTTT TTTCTGATTT AGTGCGCAAG CTGCCCGACG TTCTGATTGA ACTGGAGCTG CAAAACGATG TGATCAACAT TCATTACAAT GAATCGGATT TATCCCTCAG AGGCTATGAC CCGGAGGAAT TTCCCTTATT ACCGGATCTC TTTGATGCGG AAACCTTTAA CTTACCTGTC TCCATCTTTA AAACCATGAT TAAACAGACT ATTTTTGCCT GTTCTGCTGA AGAGAGCCGT CCTGTCTTTA CAGGCTGCCT GCTCCAGATC GAAGATGGAA GCTTACGTTT AATTGCTACA GATACCCATC GTCTGGCTTA CCGGATTGCC GAAATTTCTA ATCCTGAACA GATCAAGTTT CAGGGTATTA TTCCCGCCAA GACCTTAGGG GAAATTTATC GCTTGCTCAG GGATGAGGAT GAGAATTTAT TCATCCGCTT TAATCAAGCC CAAATCGTTT TTCAGTTTGG AGCTGTCCAT CTCCTCTCCC GTTTGATTGA AGGACAATTC CCCAATTATA AACAAGTTAT CCCCCAATCC TGCCAAACGA AGGTTTTATT ATCAGCGCGG CTTTTCCAGG ATTCTGTGGA AAGAGCTTCT TTGCTGGCCC GGGATGGGAG CCATACCAGT ATTATCAAAC TCTCAGTGGA TACAGAGAGA TTGTCCATTG ATCAGACCTC GGAATTAGGT AAGATATCCG AGCAGATGGA AGTAAAAAAA GAGGGCAATG ACGTCAAGAT TGCTTTTAAC TCCAAATTTT TATTGGATGT GCTTAAAATT ATTGATTCTG AAGAGATCGT TTTTGAATTG TCGGGTTCTT ACAGCCCGGG AATCATTCGT CCCGTCGACG ATCCCAACTA TCTCTATCTT GCTTTGCCTG TGCGGACGTC TTAA
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Protein sequence | MKIYCSKDSL ITGVNTVQKA VSNKNTLPVL QGIMIRAEGQ SLIFEATDLE IGIRCVVPAQ VEKEGVVVLP SRLFSDLVRK LPDVLIELEL QNDVINIHYN ESDLSLRGYD PEEFPLLPDL FDAETFNLPV SIFKTMIKQT IFACSAEESR PVFTGCLLQI EDGSLRLIAT DTHRLAYRIA EISNPEQIKF QGIIPAKTLG EIYRLLRDED ENLFIRFNQA QIVFQFGAVH LLSRLIEGQF PNYKQVIPQS CQTKVLLSAR LFQDSVERAS LLARDGSHTS IIKLSVDTER LSIDQTSELG KISEQMEVKK EGNDVKIAFN SKFLLDVLKI IDSEEIVFEL SGSYSPGIIR PVDDPNYLYL ALPVRTS
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