Gene Dhaf_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0001 
Symbol 
ID7261994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp93 
End bp1442 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content47% 
IMG OID643559901 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_002456507 
Protein GI219666072 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.41272e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCCC GTTCTCTACA AGTACTTTGG CAAGAAACTC TATCAAAACT GGAAAATGAA 
CTTTCTAAAC CAAGTTTTGA AACCTGGCTC AGTTCCACAT ACCTCCTTGA TATCGAAGGA
GACACTCTGA TCGTCAGCGT ACCTAATGAA TTTGCCAAGG ATTGGCTGGA GAGCCGGTAT
GCCCCCATCA TCCGCTCCAC AGTTCAATCC ATCCTTGGCC AATCCATGAA TTTGCGCTTT
CTTGTCACTT CAATCCATGA AACAACACAA CCAGGAGACA ATCAAAACAA AGCGTCTTCT
AATTCTAAAG CGGAACCCGC GGACAATAAA ACCCTCAATT CAAAGTATAC CTTTGACACC
TTTGTCATCG GCAACAGCAA CCGCTTTGCC CATGCCGCCG CCCTGGCTGT GGCCGAGTCC
CCCGCCCTGG CCTATAATCC GTTATTTATC TATGGCGGTG TCGGCTTAGG CAAGACCCAC
CTGATGCACG CTATCGGCAA TGCGGTCATT CAACGCTCCC CCAGCACCAG GGTCCTTTAT
GTCTCCAGTG AAAAATTTAC CAATGAACTC ATTGAATCCA TCCGTGATCA AAATCCCATT
GAATTTCGCA ATCACTACCG CAATGTGGAT ATTTTGTTGA TTGACGATAT CCAATTTCTC
GCCGGTAAAG AAGGTACCCA GGAGGAATTC TTCCATACCT TTAACGCCCT CCATGATGCC
AATAAGCAAA TTATTATTTC CTCCGACCGT CCTCCCAAAG AAATCCCCAC CCTTGAAGAT
CGCTTGCGTT CCCGTTTTGA ATGGGGATTG ATCACAGATA TTCAACCGCC GGATTTGGAG
ACGCGCATCG CTATCCTGAG AAAAAAAGCC AAGCTGGAAA ACCTGCAGGT GGCCAACGAA
GTCATGGTCT ATATCGCGGA CAAAATTCAC TCCAATATCA GAGAGCTGGA AGGCGCTTTG
ATCCGGGTCA TGGCCGTAGG CTCCTTGACT TCCAATCCGA TCACCGTTGA GACGGCAGCC
GAAGCTCTTA AGGATATTAT TCCCGTCAGC ACTCCTAAAG AAATAACCAT TGAAATGATT
CAGCAAGCGG TGGCCGATTT TTATCATTTG TCTTTAGGTG AGTTTAAGGC CAAAAAGAGA
ACCCGGGCTG TGGCTTTTCC ACGTCAAATC GCCATGTATT TATCCAGAGA ACTTACCGAC
AACTCTTTGC CCAGAATTGG TGATGAGTTT GGAGGAAGAG ATCATACCAC CGTTCTCCAT
GCCTATGATA AAATCTCCGA GAGCCGCCAA AATGATCCTC TCCTGGATAG GAAAATTAAT
GAAATCATTC AAATGATCCA ATCCCTCTAA
 
Protein sequence
MPPRSLQVLW QETLSKLENE LSKPSFETWL SSTYLLDIEG DTLIVSVPNE FAKDWLESRY 
APIIRSTVQS ILGQSMNLRF LVTSIHETTQ PGDNQNKASS NSKAEPADNK TLNSKYTFDT
FVIGNSNRFA HAAALAVAES PALAYNPLFI YGGVGLGKTH LMHAIGNAVI QRSPSTRVLY
VSSEKFTNEL IESIRDQNPI EFRNHYRNVD ILLIDDIQFL AGKEGTQEEF FHTFNALHDA
NKQIIISSDR PPKEIPTLED RLRSRFEWGL ITDIQPPDLE TRIAILRKKA KLENLQVANE
VMVYIADKIH SNIRELEGAL IRVMAVGSLT SNPITVETAA EALKDIIPVS TPKEITIEMI
QQAVADFYHL SLGEFKAKKR TRAVAFPRQI AMYLSRELTD NSLPRIGDEF GGRDHTTVLH
AYDKISESRQ NDPLLDRKIN EIIQMIQSL