Gene BCAH820_5572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH820_5572 
SymbolyycF 
ID7190470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH820 
KingdomBacteria 
Replicon accessionNC_011773 
Strand
Start bp5280951 
End bp5281658 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content40% 
IMG OID643558982 
ProductDNA-binding response regulator YycF 
Protein accessionYP_002454492 
Protein GI218906658 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.81316e-29 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGGAA AGAAAATTTT AGTAGTTGAT GATGAAAAGC CGATTGCAGA TATTTTGAAG 
TTCAACCTAG AAAAAGAAGG TTTTGAAATT GTAATGGCAC ACGATGGTGA TGAAGCGATT
GAAAAAGCGA CTGAAGAACA GCCAGATATG GTTTTATTAG ATATTATGCT ACCAGGTAAG
GATGGCTTAG AGGTTTGCCG TGAAATACGT AAAAGCTCAG AAATGCCGAT TATTATGCTT
ACAGCGAAGG ACTCTGAAAT CGATAAAGTA TTAGGTTTGG AGCTTGGGGC AGATGATTAT
GTAACGAAGC CGTTTAGTAC GAGGGAATTA CTTGCTCGCG TGAAGGCGAA TTTACGTCGC
CATCAGCAAG GTGGTGCTGC AGAAAAAGAA GAAAATACGG AAATGGTTAT TGGGCCAATT
GTTATCAATC CCAATGCGTA TAGTGTAACG AAACGTGAGG AAAACATTGA GCTTACACAC
CGTGAATTTG AGCTGCTGCA TTATTTAGCA AAACATTTAG GACAAGTTAT GACACGCGAA
CATTTATTGC AAACAGTTTG GGGTTATGAC TACTTTGGAG ATGTACGTAC AGTGGATGTA
ACAGTACGTC GTCTACGTGA AAAAATTGAA GATAATCCAA GTCATCCTAC ATTAATTGTC
ACTAGACGTG GAGTAGGGTA TTACTTGCGT GACCCAGAGC AGGAATAG
 
Protein sequence
MMGKKILVVD DEKPIADILK FNLEKEGFEI VMAHDGDEAI EKATEEQPDM VLLDIMLPGK 
DGLEVCREIR KSSEMPIIML TAKDSEIDKV LGLELGADDY VTKPFSTREL LARVKANLRR
HQQGGAAEKE ENTEMVIGPI VINPNAYSVT KREENIELTH REFELLHYLA KHLGQVMTRE
HLLQTVWGYD YFGDVRTVDV TVRRLREKIE DNPSHPTLIV TRRGVGYYLR DPEQE