Gene BCAH820_4664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH820_4664 
Symbol 
ID7187182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH820 
KingdomBacteria 
Replicon accessionNC_011773 
Strand
Start bp4418394 
End bp4419083 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content38% 
IMG OID643558074 
ProductRNA pseudouridine synthase family protein 
Protein accessionYP_002453610 
Protein GI218905776 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value0.000338172 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA ACCAATATAT AAGCGAAGCA AATTCTTGCT CAAGACGCGA AACAGATCGC 
CTTATTAAAG CCGGGCGCGT AGCGATTAAC GGCGAAATAT GTACGCACGG TGCACTTGTT
AATGAAGGTG ATGTTGTAAC GATTGATGGA CAGGTTATTG CAAAAGAAGA GAAAGAAAAG
GTGTATATTG CCTTTCATAA ACCAGTTGGG ATTACCTGCA CAGCAGCTGA GCATATTGAA
GGTAATATTA TTGATTATAT TAATTACCCA GAGCGTATCT TTCCTGTTGG ACGATTAGAT
AAAGCATCAG AAGGACTTAT TTTATTAACG AATGACGGCG GGATTGCCAA TCAAATTTTA
CACGGTGATC ATGAGCACGA GAAAGAATAT GTTGTTACAG TTGATAAACC TTTTACAGAT
TGGTTTATTA ATGAGATGTC CAGCGGTGTA AAGATTAAAG ATGGAATAAC TAAGCCATGT
AAAGTGACGA GAGTGGATAA GTCTACGTTT CGCATCGTTT TAACGCAAGG AATGAACAGA
CAAATTCGTA GAATGAGCCG AGCTTTCGGG TTTACTGTAA CAAAGTTAAA GCGAGAACGC
ATTATGAATA TAGAGCTAAA TGATCTTGAA GTAGGAAAGT GGCGAGACAT TACAGCTGAA
GAATTAGAAT TATTAATAGG ACAGTTATAG
 
Protein sequence
MKINQYISEA NSCSRRETDR LIKAGRVAIN GEICTHGALV NEGDVVTIDG QVIAKEEKEK 
VYIAFHKPVG ITCTAAEHIE GNIIDYINYP ERIFPVGRLD KASEGLILLT NDGGIANQIL
HGDHEHEKEY VVTVDKPFTD WFINEMSSGV KIKDGITKPC KVTRVDKSTF RIVLTQGMNR
QIRRMSRAFG FTVTKLKRER IMNIELNDLE VGKWRDITAE ELELLIGQL