| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_1930 |
|---|
| Symbol | cdd1 |
|---|
| ID | 7188451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 1836402 |
|---|
| End bp | 1836797 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643555342 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_002450881 |
|---|
| Protein GI | 218903047 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 8.03425e-50 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA AAAAATATAT TGAAGAAGCA AATAAGATGT TGTCGAAAGC ATATATTCCG
TATTCAAAAT TTCCTGTTGG GGCAGCATTA GTTACGAAAG AAGGTAAAAT CTATACTGGT
TGTAATATAG AAAATGCTTC TTACGGTTTA TGTAACTGTG CAGAAAGAAC AGCAATCTTT
AAAGCAGTAT CAGAAGGTGA GCGCGACTTT AGTTACTTAG TTATTACAGG AGAAACGGAC
GGACCAATTT CACCATGTGG TGCTTGTAGA CAAGTAATTG CTGAATTCTG TGATCCGAAA
ATGCCTGTAT TACTAACGAA TGTAAAAGGC GATGAAAAAG AAGTGACTGT TGAGCAGTTA
CTGCCAGGTG CTTTTACAAA TGACGATTTA AAATAA
|
|---|
| Protein sequence | MDKKKYIEEA NKMLSKAYIP YSKFPVGAAL VTKEGKIYTG CNIENASYGL CNCAERTAIF
KAVSEGERDF SYLVITGETD GPISPCGACR QVIAEFCDPK MPVLLTNVKG DEKEVTVEQL
LPGAFTNDDL K
|
|---|
| |