| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_0059 |
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| Symbol | mfd |
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| ID | 7187981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH820 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011773 |
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| Strand | + |
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| Start bp | 54533 |
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| End bp | 58063 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643553463 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002449089 |
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| Protein GI | 218901255 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 200 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGTT TATTAGAGCA GTTTTATAAA AATGAAGAGA TCCAATCGGT CATTAATGGA
CTAGAAGATG GTTTAAAAGA GCAACTTGTA TCAGGTATGG CAACATCTTC TCGTTCGTTA
TTAATGGCGG CCTTATATAA AAAAACAAAA AAATCACAAC TTATTGTGAC GCATAATTTA
TATCAAGCAC AAAAAGTACA TGAAGATTTA GTGGCGTTAC TTGGTGAAAA AGATGTATGG
CTATATCCAG TAAATGAATT GATAGCATCA GAACTTGGTG TTGCAAGCCC AGAATTGAAG
GCACAACGTA TTGAAGTGTT AAATCGCTTA GCTGCAGGAG AGCACGGGAT TATTGTAGCA
CCAGTTGCAG GACTACGCAG ATTTTTACCA ATGAAAGAGT TGTGGAAGCA AAGGCAAATC
GAAATCAGTC TAGGGCAAGA GATTGATTTA GATACATTTT TGCATACTTT ACATCATATT
GGCTATGAGC GTAAGTCTAT GGTAGAAGCT CCTGGAGAAT TTAGTTTGCG CGGGGGAATA
TTAGATATTT ATCCACTAAC TGAGGAGCTA CCATTTCGTA TTGAATTTTT CGATACAGAA
GTTGATTCTA TTCGGTTATT TGATGTGGAT GAACAGCGCT CTCAAGATAA AAAAGAAAGT
GTTAGATTCG GTCCAGCAAC AGAGTTTCTA TTTTCACAGG AAGAATTGAA ATCGGGAATA
AAGCATCTTG AAGAAGGTCT GACTAAGACG ATGCAAAAAC TTTCCGATGA TAAGTTGAAG
ACTACAGTGC TTGAGACGGT CAGTCATGAA ATTGAGATGT TAAAAAACGG GCAAAGTATA
GAACAGATGT TTAAATATTT ATCTATTTTC TATAACGAAC CTGCTAGTCT GATAGATTAT
TTACCAGAAG ATGGTGTTGT GATTTTAGAT GAAATTTCAC GTATTCAAGA AACAGCATCT
CATCTTGAAT CAGAAGAGGC GGAATGGTAT ATATCCCTTC TTGGTGAGGG AACAATTATT
CAAGATTTAT CTTTCTCTCA TTCGTTTGAA GAATTTCTTC ATCATAAAAA AAGAAGTTTT
GTATATTTAA CGTTATTCTT ACGTCATATA GCGCATACAC ATCCGCAAAA CATTGTGAAT
GTGACATGTA AAACAATGCA AGATTTCCAT GGGCAGATGC AGTTGTTGAA AACTGAAATT
GATAGATGGA ACGAAGGGCA TTTTACGACC GTTGTGCTAG GTACAGATGA TGAGCGTGTG
AAAAAACTAC AACATATTTT AAGTGATTAT GATATTGATG CAGATATTGT AGAGGGCACA
GATATATTAT TGCCTGGAAG GTTACAAATT GCTGTAGGTG ATTTACATGC AGGGTTTGAA
ATGCCGATGC AAAAGCTTGT TGTCATTACT GAAAAAGAGC TTTTTCATAA GAAAGTTAAA
AAATCACAAC GTAAGCAAAA GTTATCGAAT GCTGAACGCA TTAAAAGTTA TTCGGAATTA
AAAGTTGGGG ATTATGTAGT TCATGTAAAT CATGGTATAG GTAAATTCTT AGGTATTGAG
ACATTAGAGA TTAATGGTGT TCATAAAGAT TATTTGAATA TTAAATATCA AGGTAATGAT
AAGTTATACG TTCCAATTGA ACAAATTGAC CAAGTGCAAA AATATGTAGG ATCTGAAGGT
AAGGATCCGA AAGTTTATAA ATTGGGCGGA AACGATTGGA AAAAGGTCAA AACAAAAGTT
GAAAAATCTG TACAAGACAT TGCGGATGAC CTCATTAAAC TCTATGCTGA GCGCGAAGCT
TCAAAGGGTT ATGCATATAC ACCAGATACG GCAGAACAAC AAGAATTTGA GTCTTCTTTC
CCGTATCAAG AGACAGAGGA TCAATTACGT TCTATTGAAG AGATTAAAAA GGATATGGAA
CGCGGACGTC CGATGGATAG GCTTCTTTGT GGTGATGTAG GATATGGAAA GACGGAAGTA
GCTATTCGTG CGGCGTTTAA AGCAATTATG GATGAAAAAC AAGTTGCAAT TTTAGTGCCG
ACAACGATCC TTGCACAACA ACACTATGAA ACAATTCGAG AGCGTTTTCA AGATTATCCA
ATCAATATAG GATTATTAAG TAGATTCCGT ACGAGAAAGC AGCAAAATGA AACAATTAAA
GGTTTAAAAG ATGGCACGGT AGATATTGTA ATCGGAACGC ATCGTATTTT ATCTAAAGAT
GTTACTTATA AAGATTTAGG TCTTCTTATT ATTGATGAAG AACAAAGATT TGGCGTAACA
CATAAAGAAA AAATTAAACA ATTAAAAGCA AATGTTGACG TATTAACATT AACGGCAACC
CCGATCCCGC GTACGCTTCA TATGTCTATG CTTGGTGTAC GTGATTTATC TGTTATTGAG
ACGCCGCCGG AAAATCGTTT CCCAGTTCAA ACATATGTAG TTGAGTATAA TCCAGCGTTA
ATGCGAGAGG CGATAGAACG CGAGCTTGCA AGAGGTGGGC AAGTTTACTT CCTATATAAT
CGTGTGGAGG ATATCGAACG AAAAGCAGAT GAAATTTCGA TGTTAGTTCC AGATGCACGT
GTCACTTATG CACATGGGAA AATGAACGAA AGTGAATTAG AGTCTGTTAT GCTATCGTTT
TTAGAAGGGC AGCATGATGT TCTTGTAAGT ACAACGATTA TTGAGACAGG TGTAGATATT
CCGAATGTAA ATACATTAAT TGTATTTGAT GCAGATCGTA TGGGATTATC GCAGTTGTAT
CAGCTTCGTG GGCGTGTTGG ACGTTCTAAT CGTGTTGCAT ATGCTTACTT TGCATACAAA
CGAGATAAAG TGTTATCAGA AGTTGCGGAG AAGCGTCTGC AAGCCATTAA GGAGTTCACA
GAGCTTGGGT CTGGTTTCAA AATTGCGATG CGAGATTTAT CAATTCGTGG TGCAGGTAAC
TTGTTAGGAG CTGAACAACA TGGATTTATT GATTCTGTCG GATTTGATTT ATATTCTCAA
ATGTTAAAAG ACGCAATTGA ACAGCGTAGA GGAACAGACG GAGTTGAAAA TACAGTTAAT
GTTGAAATTG ATTTAGAAGT AGATGCATAT TTACCAGATG CTTATATTTC GGATAGTAAA
CAAAAAATTA TGATGTATAA ACAATTTAGA GGTGTTTCTG CGATTGAAGA TATTGAAGAG
TTGCAGGAAG AGATGATAGA TAGATTTGGT GATTACCCGC AAGAAGTTGG TTACTTATTA
CAAATTGCAA ATATTAAAGT ATTGGCAATG AAAGAACAAA TTGAATTAAT TAAGCAAAAT
AAATTTGAAG TAACAATTCT GTTCTCAGAA CAAGCGAGTC AAAATATTGA TGGTGGAAAA
TTATTCATGC TCGGAAATAG TTTTGGACGT ATGATCGGTT TAGGAATGGA AGGATCACAA
TTGAAAATCG TCATGAAAAC AAATGGCTTA GAGACATCGA AGTGGTTAAC AATTGCTGAA
AATTTATTAA AAGGCTTGCC AGATGTAAAA AAAGAAGTCA TAAATGCCTA A
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| Protein sequence | MIGLLEQFYK NEEIQSVING LEDGLKEQLV SGMATSSRSL LMAALYKKTK KSQLIVTHNL
YQAQKVHEDL VALLGEKDVW LYPVNELIAS ELGVASPELK AQRIEVLNRL AAGEHGIIVA
PVAGLRRFLP MKELWKQRQI EISLGQEIDL DTFLHTLHHI GYERKSMVEA PGEFSLRGGI
LDIYPLTEEL PFRIEFFDTE VDSIRLFDVD EQRSQDKKES VRFGPATEFL FSQEELKSGI
KHLEEGLTKT MQKLSDDKLK TTVLETVSHE IEMLKNGQSI EQMFKYLSIF YNEPASLIDY
LPEDGVVILD EISRIQETAS HLESEEAEWY ISLLGEGTII QDLSFSHSFE EFLHHKKRSF
VYLTLFLRHI AHTHPQNIVN VTCKTMQDFH GQMQLLKTEI DRWNEGHFTT VVLGTDDERV
KKLQHILSDY DIDADIVEGT DILLPGRLQI AVGDLHAGFE MPMQKLVVIT EKELFHKKVK
KSQRKQKLSN AERIKSYSEL KVGDYVVHVN HGIGKFLGIE TLEINGVHKD YLNIKYQGND
KLYVPIEQID QVQKYVGSEG KDPKVYKLGG NDWKKVKTKV EKSVQDIADD LIKLYAEREA
SKGYAYTPDT AEQQEFESSF PYQETEDQLR SIEEIKKDME RGRPMDRLLC GDVGYGKTEV
AIRAAFKAIM DEKQVAILVP TTILAQQHYE TIRERFQDYP INIGLLSRFR TRKQQNETIK
GLKDGTVDIV IGTHRILSKD VTYKDLGLLI IDEEQRFGVT HKEKIKQLKA NVDVLTLTAT
PIPRTLHMSM LGVRDLSVIE TPPENRFPVQ TYVVEYNPAL MREAIERELA RGGQVYFLYN
RVEDIERKAD EISMLVPDAR VTYAHGKMNE SELESVMLSF LEGQHDVLVS TTIIETGVDI
PNVNTLIVFD ADRMGLSQLY QLRGRVGRSN RVAYAYFAYK RDKVLSEVAE KRLQAIKEFT
ELGSGFKIAM RDLSIRGAGN LLGAEQHGFI DSVGFDLYSQ MLKDAIEQRR GTDGVENTVN
VEIDLEVDAY LPDAYISDSK QKIMMYKQFR GVSAIEDIEE LQEEMIDRFG DYPQEVGYLL
QIANIKVLAM KEQIELIKQN KFEVTILFSE QASQNIDGGK LFMLGNSFGR MIGLGMEGSQ
LKIVMKTNGL ETSKWLTIAE NLLKGLPDVK KEVINA
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