| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B5701 |
|---|
| Symbol | tpiA |
|---|
| ID | 7182800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 5006026 |
|---|
| End bp | 5006781 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643553027 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_002448669 |
|---|
| Protein GI | 218900258 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000644486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 93 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAC CAATTATCGC AGGTAACTGG AAAATGAATA AAACTCTATC TGAAGCAGTT
AGCTTCGTAG AGGAAGTTAA AGGTCAAATC CCAGCAGCTT CAGCTGTTGA TGCAGTAGTT
TGCTCTCCAG CTCTATTCTT AGAGCGCCTT GTAGCAGCAA CTGAAGGAAC TGATTTACAA
GTAGGTGCAC AAAACATGCA CTTCGAAAAA AATGGTGCAT TCACTGGCGA AATTAGCCCA
GTAGCACTTA GCGACTTAAA AGTAGGCTAC GTAGTACTTG GCCACTCTGA GCGTCGTGAA
ATGTTTGCTG AAACAGACGA ATCAGTAAAC AAAAAGACTC TAGCAGCATT TGAACATGGT
TTAACACCAA TCGTATGTTG TGGTGAGACT TTAGAAGAGC GCGAAAGCGG AAAAACATTT
GATCTAGTAG CAGGTCAAGT GACAAAAGCA CTTGCAGGTT TAACAGAAGA GCAAGTTAAA
GCAACTGTTA TCGCTTATGA GCCTATCTGG GCTATCGGTA CAGGTAAATC TTCTTCTTCT
GCAGATGCAA ATGAAGTATG TGCGCACATC CGTAAAGTTG TTGCAGAAGC TGTTTCTCCA
GAAGCTGCAG AAGCTGTTCG TATTCAATAC GGCGGTAGCG TAAAACCAGA AAACATTAAA
GAGTATATGG CACAATCTGA CATCGACGGC GCTTTAGTTG GCGGTGCTAG CTTAGAGCCT
GCTTCGTTCT TAGGTCTTCT GGGGGCGGTA AAATGA
|
|---|
| Protein sequence | MRKPIIAGNW KMNKTLSEAV SFVEEVKGQI PAASAVDAVV CSPALFLERL VAATEGTDLQ
VGAQNMHFEK NGAFTGEISP VALSDLKVGY VVLGHSERRE MFAETDESVN KKTLAAFEHG
LTPIVCCGET LEERESGKTF DLVAGQVTKA LAGLTEEQVK ATVIAYEPIW AIGTGKSSSS
ADANEVCAHI RKVVAEAVSP EAAEAVRIQY GGSVKPENIK EYMAQSDIDG ALVGGASLEP
ASFLGLLGAV K
|
|---|
| |