| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B4234 |
|---|
| Symbol | glpF |
|---|
| ID | 7184354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | + |
|---|
| Start bp | 1016751 |
|---|
| End bp | 1017572 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643548831 |
|---|
| Product | glycerol uptake facilitator protein |
|---|
| Protein accession | YP_002444502 |
|---|
| Protein GI | 218896091 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000125591 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.000000000395439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAT TTTTAGGAGA GTTAATAGGG ACTGCGTTGT TAATCGTACT TGGTGGCGGC
GTTTGTGCTG GTGTAAGTTT AAAGAAATCG TTTGCGAAAG ATTCAGGTTG GATTGTTATT
ACAATGGGCT GGGGCTTAGC AGTAGCGGTT GCAGCGTATG CGGTTGGATC AATTAGTGGG
GCACATTTGA ATCCAGCTTT AACGATAGGA CTAGCATTTA AGGGAGCGTT CCCATGGAGT
GACGTACCAG GTTATATCGT AGCACAAATG ATTGGGGCAA TTATCGGGGC AGTTATCGTA
TATTTACATT ACTTACCACA CTGGAAAGAA ACAGAAGATC CAGGAACAAA GTTAGGTGTA
TTTGCAACAG GTCCAGCAAT TCCGAACACA TTTGCAAACC TTTTAAGTGA AATGATTGGA
ACATTCGTTT TAGTATTTGG TATATTAGCA ATTGGTGCAA ATAAATTTGC AGATGGATTA
AATCCATTTA TCGTAGGTTT CTTAATTGTA AGTATTGGTT TATCATTAGG TGGGACAACA
GGATACGCAA TTAACCCAGC ACGTGATTTA GGTCCGCGTA TCGCACACTT CTTCCTTCCG
ATTGCAGGAA AAGGCGGTTC AAACTGGAAG TATGCATGGA TTCCAGTAGT AGGTCCAATT
TTAGGTGGAT CACTTGCAGG TTTATTCCAT CAAGTTGTAT TTGAAGGAAA GCAAAATTCA
GCACTTATTT ATGTGATTAT CGCAACTGTG ATTGTACTAG CAATCTCTTA TATGACAAGT
AAAAAAAGCG GAAGCAATAC AAATAGTAGA AAAGTAGCAT AA
|
|---|
| Protein sequence | MSAFLGELIG TALLIVLGGG VCAGVSLKKS FAKDSGWIVI TMGWGLAVAV AAYAVGSISG
AHLNPALTIG LAFKGAFPWS DVPGYIVAQM IGAIIGAVIV YLHYLPHWKE TEDPGTKLGV
FATGPAIPNT FANLLSEMIG TFVLVFGILA IGANKFADGL NPFIVGFLIV SIGLSLGGTT
GYAINPARDL GPRIAHFFLP IAGKGGSNWK YAWIPVVGPI LGGSLAGLFH QVVFEGKQNS
ALIYVIIATV IVLAISYMTS KKSGSNTNSR KVA
|
|---|
| |