Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B4006 |
Symbol | potB |
ID | 7184285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | + |
Start bp | 1240399 |
End bp | 1241247 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643549059 |
Product | spermidine/putrescine ABC transporter, permease protein |
Protein accession | YP_002444729 |
Protein GI | 218896318 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.369906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000000961653 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAAAAAAG GGAAATTACT CGCACTACCT ACAGTCGCGT GGTTATTAAT TTTCTTCCTA ATCCCGCTCG TATTCGTATT AGGATTCGCC TTCATGCAGC GCGGAGCTTA CGGGACAGTA GAAATGCAAT TTACGCTGGA GAATATATCC CGTGTGTTTG ATCCATTGTA CTTAGGGACA TTATGGGAAA CTGTTAAAAT CGCAGTTATT ACTACAGTAA TATGTTTATT AATTGGTTAT CCATTTGCGT ATACAATTAC AATTGTTGAC CGCAAATATC GTTCTATTCT TTTATTATTG GCAACGATCC CGTTTTGGAT TAACTTTCTT GTTCGTTCAT ACGCATGGAT TGTTATTTTA CGTTCACAAG GCCTTGTGAA TACGTTGTTA TTAAAGCTTG GTATTATTAG TGAACCGTTA AATTTATTAT ATAATACTCC TTCTGTAATA CTCGGAATGG TCTATTCTTT ATTACCATTT ATGATCTTAC CAGTGTATGC AGCAATTGAG CAGCTAGATA AGCGTAAGCT AGAAGCGGCT TATGATTTAG GAGCAACACC AATAAAGGCA TTTTGGAATA TAACAGTGCC GATGACAATG TCAGGAATTG CGACTGGTTC TATTTTAGTA TTCGTTTCTT CTATCGGAAT GTTTGTTGTA TCAGACGTGA TGGGCGGATC GAAAGTAGCA TTAATCGGAA ACGTTATTCA AAACCAATTC TTAGGTGCAC GTGACTGGCC GTTTGGATCT GCGTTATCGA TTATCGTTGT TCTATTCTCT GTTCTGTTAA TTTACTTATA TTATCGTGCA ACGAAAGTAT ATAAATATAA TGAGAACGGA GGGGAATAG
|
Protein sequence | MKKGKLLALP TVAWLLIFFL IPLVFVLGFA FMQRGAYGTV EMQFTLENIS RVFDPLYLGT LWETVKIAVI TTVICLLIGY PFAYTITIVD RKYRSILLLL ATIPFWINFL VRSYAWIVIL RSQGLVNTLL LKLGIISEPL NLLYNTPSVI LGMVYSLLPF MILPVYAAIE QLDKRKLEAA YDLGATPIKA FWNITVPMTM SGIATGSILV FVSSIGMFVV SDVMGGSKVA LIGNVIQNQF LGARDWPFGS ALSIIVVLFS VLLIYLYYRA TKVYKYNENG GE
|
| |