Gene BCG9842_B1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B1617 
Symbol 
ID7181463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp3531519 
End bp3532052 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content31% 
IMG OID643551424 
ProductRNA polymerase sigma-70 factor, ECF subfamily 
Protein accessionYP_002447094 
Protein GI218898683 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.4953e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1.7176e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGTAA TCCCTTTATA TAAAATGATT ATAAAAGAAG AAACCGATGT TTCTTTAGCG 
AAAAAAGGCG ATCATGAAGC CTTTATAACG CTTATACATA CAGAAAAAGT GAAGATGTAT
CGAATAGCAA AGGCGATGTT ACGTGATGAG ACAAATATAG AGGACGCGAT ACAGACAACA
ATTTTAAAAG CTTATGAAAA TATAAAAAAA CTAAAAAAAG AAGAGTTTTT TCAAACTTGG
TTAATTCGAA TTTTAATGAA TGAGTGTAAC AATATTATTA GAGCGTATAA AAATGTAATT
GTGACAGAAG AGAATGATTA CAATATGAGT GCGTGTGATC AGTATGAAGA TATAGATTTG
TATAATGCGA TTCAATCGTT ACATGAAGAA TTAAGAGCTG TTACGGTGCT TTATTACTAT
GAAGATATGA ATCAAGATAG TATTGCGAAG CTGTTAGAAA TACCGAAAGG AACAGTGAAA
TCAAGATTAT CGCGTGCGAG GGAACAACTA CAAAAAAGAT TAAAGATGGA ATAG
 
Protein sequence
MKVIPLYKMI IKEETDVSLA KKGDHEAFIT LIHTEKVKMY RIAKAMLRDE TNIEDAIQTT 
ILKAYENIKK LKKEEFFQTW LIRILMNECN NIIRAYKNVI VTEENDYNMS ACDQYEDIDL
YNAIQSLHEE LRAVTVLYYY EDMNQDSIAK LLEIPKGTVK SRLSRAREQL QKRLKME