Gene BCG9842_B1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B1490 
Symbolhfq 
ID7183563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp3643920 
End bp3644144 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content30% 
IMG OID643551551 
ProductRNA-binding protein Hfq 
Protein accessionYP_002447221 
Protein GI218898810 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.77401e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0133073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAT CAATCAATAT TCAAGATCAG TTTTTAAATC AACTCCGTAA AGAAAATACG 
TTTGTTACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GACTAATTAA AGGATTTGAT
AATTTTACAG TCCTACTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACATGCAATT
TCTACATTTG TACCACAAAA AAATGTTTCA ATTGAATTAG AATAG
 
Protein sequence
MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI 
STFVPQKNVS IELE