Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B1490 |
Symbol | hfq |
ID | 7183563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | - |
Start bp | 3643920 |
End bp | 3644144 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643551551 |
Product | RNA-binding protein Hfq |
Protein accession | YP_002447221 |
Protein GI | 218898810 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000177401 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0133073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAAT CAATCAATAT TCAAGATCAG TTTTTAAATC AACTCCGTAA AGAAAATACG TTTGTTACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GACTAATTAA AGGATTTGAT AATTTTACAG TCCTACTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACATGCAATT TCTACATTTG TACCACAAAA AAATGTTTCA ATTGAATTAG AATAG
|
Protein sequence | MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI STFVPQKNVS IELE
|
| |