| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B1312 |
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| Symbol | topA |
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| ID | 7186585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus G9842 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011772 |
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| Strand | - |
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| Start bp | 3818736 |
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| End bp | 3820814 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643551727 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002447397 |
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| Protein GI | 218898986 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000876522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 7.60195e-25 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCAGATT ACCTCGTGAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAGAAATAT
TTAGGGAAAA AATACAAAGT TGTCGCGTCT ATGGGACATG TTCGCGATTT GCCAAAAAGT
CAAATGGGGA TAGAAGTAAA GAACAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAA
GGTCCCGTCT TAAAAGATTT AAAATCAGCG GCGAAAAAAG CAAAGAAAGT CTATCTCGCG
GCCGATCCAG ACCGCGAAGG GGAAGCAATT GCTTGGCATT TAGCGAATAC GTTAAATGTG
GACGTTGAAT CAGATTGTCG GGTTGTGTTT AATGAGATTA CGAAAGATGC AATCAAAGAA
TCATTTAAAC ATCCTCGTGC AATTAATATG GATTTAGTAG ATGCACAACA AGCAAGACGT
ATACTTGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA
GGATTAAGTG CAGGGCGTGT ACAATCTGTA GCAGTTCGTT TAATCATCGA ACGTGAAAAG
GAAATTCAAA GCTTTGAACC TGAAGAATTC TGGACAATTA AAACAGAATT TGTAAAAGGA
AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGGG AAAAGGTTCA ATTAACGAAT
GAAACGCAAG TGAATGAAAT AATTGAACAG ATGAAAGACA ATGCGTTTTC AGTTGAAAAT
GTAACGCGCA AAGAGCGAAA ACGTAATCCT GCATTACCGT TTACAACATC TTCCTTGCAA
CAAGAAGCAG CACGTAAGTT AAACATGCGA GCAAAGAAAA CGATGATGCT TGCACAGCAA
TTGTATGAAG GGATAGATCT TGGAAAACAA GGAACTGTAG GTCTTATTAC GTATATGAGA
ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CTCGTACTTA CATCACTGAA
GCGTATGGTA CGGAATACAT AGGAACAGAA AAGAAGAAAG AAACGAAAAA GTCAAATGCA
CAAGATGCAC ATGAGGCAAT TCGTCCTACT TCGGTAATGA GAAAGCCAGA GGAACTAAAA
AGTTTCTTAA GTCGTGATCA ACTTCGATTA TATAAATTGA TTTGGGAGCG ATTTGTTGCA
AGTCAAATGG CGTCTGCTAT AATGGATACT GTGACAGCGA GACTCATTAA TAACAATGTT
CAGTTCCGTG CAAGTGGATC GGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTATGTAGAG
TCGAAAGATG ATGGTGCTGA AGAAAAGGAT AAGATGTTGC CGCCTTTAGA AGTAGGGGAA
ACTGTATTTT CGAAGGATTT AGAACCGAAG CAACATTTTA CACAACCTCC TCCGCGCTAT
ACAGAGGCTC GTCTAGTAAG AACACTTGAA GAACTTGGAA TTGGAAGACC GTCGACTTAT
GTACCTACAC TTGAAACGAT TCAAAAACGT GGATATGTAG GCTTGGATAA TAAACGCTTC
GTTCCGACTG AACTTGGTGA AATAGTAATT GAACTTATTT TAGAATTTTT CCCGGAAATT
ATTAACATTG AATTTACTGC CAATATGGAG CAAAGCCTTG ATGAAGTGGA AGAAGGAAAT
GCCAATTGGG TGAAAATTGT TGATGATTTC TACGTAGGAT TTGAACCGCG CTTAGAAAAA
GCGGAAAAAG AAATGCGTGA AGTGGAAATT AAAGATGAGC CAGCTGGGGA AGACTGTGAA
TTATGCGGAC ATCCAATGGT CTTTAAAATG GGTAAATACG GGAAGTTTAT GGCTTGTTCG
AATTTCCCTG ATTGTCGTAA TACAAAACCG ATTGTGAAAG AAATCGGTGT AACTTGTCCG
AAATGTGAAG AAGGACAAAT TATTGAGCGT CGTAGTAACA AAAAGAAACG CCTTTTCTAT
GGATGCGGTA CGTATCCAGA ATGTGACTTT GTATCTTGGG ATAAGCCGAT TGGTCGTAAA
TGTCCGAAGT GTGAAGGCAT GCTTGTAGAG AAGAAGTTGA AAAAAGGCGT GCAAGTACAA
TGTATTTCGT GCGATTATGA AGAAGAACAA CAAATGTGA
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| Protein sequence | MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK
GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE
SFKHPRAINM DLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIEREK
EIQSFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN ETQVNEIIEQ MKDNAFSVEN
VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR
TDSTRISETA QTEARTYITE AYGTEYIGTE KKKETKKSNA QDAHEAIRPT SVMRKPEELK
SFLSRDQLRL YKLIWERFVA SQMASAIMDT VTARLINNNV QFRASGSVVK FPGFMKVYVE
SKDDGAEEKD KMLPPLEVGE TVFSKDLEPK QHFTQPPPRY TEARLVRTLE ELGIGRPSTY
VPTLETIQKR GYVGLDNKRF VPTELGEIVI ELILEFFPEI INIEFTANME QSLDEVEEGN
ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCGHPMVFKM GKYGKFMACS
NFPDCRNTKP IVKEIGVTCP KCEEGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK
CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM
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