Gene BCG9842_B1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B1236 
SymbolsigE 
ID7185788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp3891817 
End bp3892536 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content33% 
IMG OID643551799 
Productsporulation sigma factor SigE 
Protein accessionYP_002447469 
Protein GI218899058 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.4975e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT TAAAATTTTA TTTAGTATAC CTTTGGTATA AAGTATTGCT GAAATTAGGA 
ATTAAGACCG ATGAAATTTA TTATATTGGT GGAAGTGAAG CGTTGCCACC ACCGTTAACG
AAAGAAGAAG AGGAAGTTCT TTTGAATAAA TTGCCAAAGG GAGATCAGGC AGCAAGGTCA
TTACTTATTG AACGTAACTT AAGGCTCGTT GTATATATAG CAAGAAAGTT TGAAAATACA
GGGATAAATA TTGAAGATTT GATTAGTATA GGAACAATCG GCCTTATTAA AGCGGTAAAT
ACATTTAATC CAGAAAAGAA AATAAAATTA GCAACATATG CATCGCGTTG TATAGAAAAT
GAAATTTTAA TGCATTTACG TCGAAATAAC AAAAATCGTT CAGAAGTTTC TTTTGATGAA
CCGCTAAACA TTGATTGGGA TGGGAATGAA CTGTTGTTGT CTGACGTGTT AGGTACAGAT
GATGATATTA TTACAAAAGA TTTAGAAGCT ACTGTAGATC GTCACCTTTT AATGAAAGCA
TTACACCAAT TAAATGATCG TGAAAAACAA ATTATGGAAC TTCGGTTTGG TCTTGCTGGA
GGAGAGGAAA AGACGCAAAA AGATGTGGCG GATATGCTTG GGATTTCACA GTCATACATT
TCGCGTTTAG AAAAAAGAAT TATAAAAAGA TTACGAAAAG AATTTAATAA AATGGTGTGA
 
Protein sequence
MMKLKFYLVY LWYKVLLKLG IKTDEIYYIG GSEALPPPLT KEEEEVLLNK LPKGDQAARS 
LLIERNLRLV VYIARKFENT GINIEDLISI GTIGLIKAVN TFNPEKKIKL ATYASRCIEN
EILMHLRRNN KNRSEVSFDE PLNIDWDGNE LLLSDVLGTD DDIITKDLEA TVDRHLLMKA
LHQLNDREKQ IMELRFGLAG GEEKTQKDVA DMLGISQSYI SRLEKRIIKR LRKEFNKMV