Gene BCG9842_B0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B0947 
Symboldxs 
ID7184330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp4148786 
End bp4150678 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content39% 
IMG OID643552082 
Product1-deoxy-D-xylulose-5-phosphate synthase 
Protein accessionYP_002447752 
Protein GI218899341 
COG category[I] Lipid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1154] Deoxyxylulose-5-phosphate synthase 
TIGRFAM ID[TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.9556e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value8.5811e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGATCTAA CGCAAATTCA AAACCCTAGT TTTTTGAAAG ATATGTCTAT CAGTGAACTA 
GAGGGATTGA GTGAGGATAT TCGTAAGTTT TTAATTGAAG AGCTCTCTCA AACAGGTGGA
CATATTGCGC CTAATTTAGG TGTAGTAGAA CTCACAATTG CTCTGCATAA ATTATTTGAT
AGCCCGCAAG ATAAATTTTT ATGGGATGTA GGACATCAAT CCTATGTACA TAAAATTTTA
ACTGGACGCG CGAAAGAGTT TGGTACATTA AGGCAATATC AAGGCCTATG TGGTTTTCCG
AAACGTTGTG AGAGTGAGCA CGACGTATGG GAAACTGGTC ATAGCTCGAC ATCGTTATCG
GCTGCAATGG GAATGGCTCT GGCACGTGAT TTAAAGAAAA CGAAAGAATA TGTTATACCA
ATTATTGGAG ATGGTGCTTT AACAGGCGGA ATGGCTTTAG AGGCATTGAA CCATATTGGA
CATGAAAAGA CAGATATGAT TGTTATTTTG AATGATAATG AAATGTCAAT TGCACCAAAC
GTTGGTGCGC TCCATAATGT ACTTGGTCGT TTACGTACCG CAGGAAAATA TCACTGGGTA
AAAGATGAAT TAGAGTATAT ATTAAAGAAA ATCCCAGCAG TTGGCGGGAA AGTGGCTGCG
ACAGCAGAGA AAATAAAAGA TAGTCTTAAA TATTTACTAG TATCTGGTGT CTTTTTCGAA
GAGTTAGGCT TTACATATTT AGGTCCAGTC GATGGGCATG ATTATGAAAA GCTATTCGAA
ACGTTGCAAT ATGCAAAGAA AACAAAAGGC CCAGTGCTTG TTCACGTTAT TACGAAAAAA
GGAAAAGGTT ATAAACCGGC CGAGAGTGAC GTTATTGGAA CTTGGCATGG AACAGGACCT
TATAAAATTG AATCAGGTGA CTTTGTTAAG CCGAAAGAAG TTGCACCAGC ATGGAGTGCT
GTTGTTAGTG AAACAGTACT TAAGCTAGCG AGAGCGGATG AGCGTATCGT AGCAATTACA
CCTGCAATGC CTGTTGGATC AAAACTTGAG AAATTCCAAA AAGAATTCCC AAATCGTATG
ATTGATGTAG GTATTGCAGA ACAGCATGCT ACAACGATGG CAGCAGGTAT GGCAACGCAA
GGAATGAAGC CATTCTTAGC AATTTATTCG ACATTTCTAC AAAGAGCATA TGACCAAGTT
GTTCATGATA TATGCCGCCA AAATTTAAAT GTTTTCATTG GAATAGATCG CTCAGGATTA
GTAGGAGCAG ATGGTGAAAC GCATCAAGGC GTATTTGATA TCTCATTCTT ACGTCACTTG
CCAAATATGG TGCTTATGAT GCCGAAAGAT GAAAATGAAG GGCAACATTT AGTTTATACG
GCGATGCAAT ATGAAGATGG ACCAATCGCA TTGCGTTATG CGCGCGGTAA TGGACTTGGC
GTTCATATGG ATGAAGAATT AAAGGCGATT CCGATCGGTA CGTGGGAGAC GTTAAAAGAG
GGTACACAAG CAGCTATTTT AACGTTTGGT ACGACAATAC CAATGGCGAT GGAAGCCGCT
GAGCGTCTTG AAAAAGCTGG AGTTTCAGTG AAAGTAGTGA ATGCTCGCTT TATTAAACCA
ATGGATGAAG CATATTTACA TGATCTTCTA GGAAAGAATA TACCGATTTT AACGATTGAA
GAAGCTTGTT TAATTGGTGG TTTTGGAACA GGAGTAGTTG AATTTGCATC TGAAAATGGT
TACCATAGTG CATTAGTTGA ACGAATGGGT ATTCCAGACC GCTTCATAGA GCACGGAAGT
GTAACAAAAT TATTAGAAGA AATTGGTTTA ACGACAGATG CTGTCGTAGA CCGTATTCAT
ACAATGATTC CATCAAAACA AAAAAGGGCG TAA
 
Protein sequence
MDLTQIQNPS FLKDMSISEL EGLSEDIRKF LIEELSQTGG HIAPNLGVVE LTIALHKLFD 
SPQDKFLWDV GHQSYVHKIL TGRAKEFGTL RQYQGLCGFP KRCESEHDVW ETGHSSTSLS
AAMGMALARD LKKTKEYVIP IIGDGALTGG MALEALNHIG HEKTDMIVIL NDNEMSIAPN
VGALHNVLGR LRTAGKYHWV KDELEYILKK IPAVGGKVAA TAEKIKDSLK YLLVSGVFFE
ELGFTYLGPV DGHDYEKLFE TLQYAKKTKG PVLVHVITKK GKGYKPAESD VIGTWHGTGP
YKIESGDFVK PKEVAPAWSA VVSETVLKLA RADERIVAIT PAMPVGSKLE KFQKEFPNRM
IDVGIAEQHA TTMAAGMATQ GMKPFLAIYS TFLQRAYDQV VHDICRQNLN VFIGIDRSGL
VGADGETHQG VFDISFLRHL PNMVLMMPKD ENEGQHLVYT AMQYEDGPIA LRYARGNGLG
VHMDEELKAI PIGTWETLKE GTQAAILTFG TTIPMAMEAA ERLEKAGVSV KVVNARFIKP
MDEAYLHDLL GKNIPILTIE EACLIGGFGT GVVEFASENG YHSALVERMG IPDRFIEHGS
VTKLLEEIGL TTDAVVDRIH TMIPSKQKRA