Gene BCG9842_B0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B0827 
SymbolsigA 
ID7183496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp4244083 
End bp4245210 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content39% 
IMG OID643552200 
ProductRNA polymerase sigma factor RpoD 
Protein accessionYP_002447869 
Protein GI218899458 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.04536e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.75333e-22 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTGACA AACCAGCTCG TTCTAAACAA ATTGAAACTG AAATGACCCT TGAGCAAGTG 
AAAGAGCAAC TCACTGAGCT CGGAAAAAAA CGTGGCGTTC TTACATATGA AGAGATTGCA
GAACGCATGA ATGGATTTGA AATTGAATCC GATCAAATGG ATGAATACTA TGAATATTTA
GGTGAACAAG GCATTGACTT AGTTGGTGAT AATGACAACG AAGAAGGCCC TAATAATCGC
CAAATTACAA AAACAGAAGA AGAGTTTGAC CTCAATGATT TAAGTGTACC ACCTGGGGTT
AAAATCAACG ATCCTGTTCG TATGTATTTA AAAGAAATTG GTCGTGTAGA CTTACTATCT
GCAGAAGAAG AAATTCGACT TGCAACGCGT ATTGAAGAAG GCGATGAAGA AGCGAAACGT
CGTCTTGCAG AAGCAAACTT ACGTCTTGTA GTAAGTATTG CAAAGCGCTA CGTAGGCCGT
GGTATGCTTT TCTTAGACTT AATTCAAGAA GGTAATATGG GTCTAATTAA AGCTGTTGAA
AAGTTCGATT ATCGTAAAGG TTTCAAATTT AGTACGTATG CAACTTGGTG GATTCGCCAA
GCTATTACAC GTGCCATTGC AGACCAAGCG CGAACAATTC GTATTCCAGT TCATATGGTT
GAAACGATTA ATAAGTTAAT TCGTGTACAA CGTCAATTAT TACAAGATTT AGGTCGCGAA
CCGTCTCCTG AAGAGATTGG TGAAGAAATG GATCTTGCTC CAGAAAAAGT ACGTGAAATC
TTAAAAATTG CACAGGAGCC AGTTTCTCTT GAAACACCAA TTGGTGAAGA AGATGACTCC
CATTTAGGTG ACTTTATTGA AGACCAAGAA GCAACATCGC CTGCGGACCA TGCAGCCTAT
GAATTGCTAA AAGAACAATT AGAAGATGTG TTAGATACAC TAACAGATCG TGAAGAAAAT
GTTCTGCGTC TTCGTTTCGG TTTAGATGAT GGACGAACTC GTACGCTTGA AGAAGTTGGG
AAAGTATTCG GCGTAACGAG AGAGCGTATC CGTCAAATTG AAGCAAAAGC ACTTCGCAAA
TTAAGACATC CAAGTCGTAG TAAGCGTCTT AAGGATTTCT TAGAATAG
 
Protein sequence
MADKPARSKQ IETEMTLEQV KEQLTELGKK RGVLTYEEIA ERMNGFEIES DQMDEYYEYL 
GEQGIDLVGD NDNEEGPNNR QITKTEEEFD LNDLSVPPGV KINDPVRMYL KEIGRVDLLS
AEEEIRLATR IEEGDEEAKR RLAEANLRLV VSIAKRYVGR GMLFLDLIQE GNMGLIKAVE
KFDYRKGFKF STYATWWIRQ AITRAIADQA RTIRIPVHMV ETINKLIRVQ RQLLQDLGRE
PSPEEIGEEM DLAPEKVREI LKIAQEPVSL ETPIGEEDDS HLGDFIEDQE ATSPADHAAY
ELLKEQLEDV LDTLTDREEN VLRLRFGLDD GRTRTLEEVG KVFGVTRERI RQIEAKALRK
LRHPSRSKRL KDFLE