| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B0705 |
|---|
| Symbol | secDF |
|---|
| ID | 7182428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 4356998 |
|---|
| End bp | 4359262 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643552322 |
|---|
| Product | bifunctional preprotein translocase subunit SecD/SecF |
|---|
| Protein accession | YP_002447991 |
|---|
| Protein GI | 218899580 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF
[COG0342] Preprotein translocase subunit SecD |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 102 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGC GTGGTACGAG AATTGCCGCC TTTTTCCTCA TCGTCTTATT AATCGGTGGA
GTAATTGGTG CGGCGGGAAA AGACATAGCA AAAGGAATTA GTCTAGGACT AGACCTTCGC
GGTGGTTTTG AAATTCTGTA TGAAGTAAAA CCAGCCAAAA AAGGTGATAA AATCGATCGA
GACGTACTTG TAAGTACAGT AGGTGCTCTT GAAAATCGTG TCAATGTTCT CGGTGTAAGT
GAGCCGAACA TTCAAATCGA AGGGCAAGAT CGAATTCGTG TACAGCTTGC TGGTGTACAA
GATCAGCAAA AAGCACGTGA AATGTTATCA ACACAAGCGA AATTAACATT CCGTGATGTG
GATGATAACC TTCTTATGGA TGGAACGGAT TTAAAAGGCG GCGGAGCGAA GCAAACATTT
GATGAGCAAG GCCGTGCGAG CGTAGGTCTT ACACTGAAAA GCGCTGAAAA ATTCCGTGCA
GTAACTGAAA AAATTTCTAA AATGCCACCA CCAACGAATT TAATGGTAAT TTGGCTGGAC
TTTGAAGAAG GAAAAGATTC GTATAAAGCA GAATCTGCAA AACCGAATCC GAAGTTCTTA
TCAGCGGCAA CAGTAAGCCA AGTATTTAAC CAAGCTGAAG TATCTATCGT AGGTGGAAAC
TTCACAGTTG AAAGTGCGAA ACAACTTTCA TCTTTATTAA ATGCAGGTGC ACTTCCTGTT
GATTTAAAAG AAATGTATTC AACATCTGTT GGAGCGAAAT TTGGTCAACA AGCGTTAGAG
CAAACGATTT TCGCTAGTGC GATTGGTATC GCTCTTATTT TCTTATTTAT GCTTGTATTC
TACCGTTTAC CAGGACTTGT AGCGGTTATT ATGTTAGGTC TATACATTTT CGTTACATTA
CTTGTCTTTA ACTGGATGCA TGCAGTTCTT ACGTTGCCAG GTATTGCGGC GTTAGTGCTC
GGGGTAGGTA TCGCAGTTGA TGCGAATATT ATTACGTACG AGAGATTGAA AGAAGAGCTG
AAAATTGGTA AGTCCATGAT GTCGGCATTT CGTGCTGGTA ACCATCGTTC ATTAGCAACA
ATTCTAGATG CAAACGTTAC GACTCTTGCA GCAGCTGGTG TGTTATTCGT TTATGGTAAT
AGCTCTGTAA AAGGATTCGC AACAAGTTTA ATCGTAAGTA TTTTAGTTGG TTTTATTACG
AACGTATTCG GTACTCGTTT CTTACTAGGT TTACTTGTAA AGAGCCGTTA CTTTGATAAA
AAACCAGGAT ATTTTGGTGT GAAACAAAAG GATATTATTC CATTAACAAA AGGTGTAGTA
CATCCGCCAA CGAGATTTGA TCGTATTAAC TTTGTAAATA TCGGTCATAA ATTCCTTATC
TTCTCGATTG TAGTTGTGAT TGCGGGTGCA ATTATCTTAC CAATTTTCAA ATTGAATCTT
GGTATTGACT TTGCAAGTGG TACACGTATT GACTTGCAAT CAAAACAAGC AGTTACTGTG
GCTGATGTTC ATAAAGATTT TAAAGAGTTG AACATTGATG TGAAGGAAGA AAATATTGTA
CCGACTGGGG ATGACAATAA AGGTTTCGCA GTTCGTACAT TAGGTGTTTT ATCAAAAGAT
GAAATTGCGA AAACAAAAAC ATTCTTCCAT GATAAATATG GTACGGATCC AAACATAAGT
ACAGTTTCAC CGACAATCGG TAAAGAGATT GCACGAAATG CATTTATCGC TGTACTAATT
GCTTCTGCAG TTATCATTTT ATACGTAAGT ATTCGATTCC GATTTACGTA TGCGTTATCT
GCAGTGCTTG CGTTACTACA TGACGCATTC GTTATGGTTG TTATGTTTAG TATTTTCCAA
TTGGAGGTAG ACTTAACGTT TATCGCTGCA GTACTAACAA TCATCGGTTA TTCTATTAAT
GACTCGATTG TTACATTTGA TAGAAACCGT GAATTATACA AACAGAAAAA ACGAGTTCGC
GATATAAAAG ACTTAGAAGA AATCGTAAAT GCAAGTATTC GCCAAACGCT TGGTCGTTCG
ATTAACACAG TATTAACAGT GTTATTCCCA GTAATTGCAC TGCTTATCTT TGGTAGTGAG
TCATTACGTA ACTTCTCGTT TGCGTTACTT GTTGGATTAA TTGTAGGTAC GTACTCTTCT
GTTTTCGTTG CTTCTCAAAT TTGGTTAATG CTTGAAAACC GTCGTTTGAA AAGAGGTAAA
AACAAGAAGA AGGTTGAGAA AGTAGAATCT GAACCGCAAG TATAG
|
|---|
| Protein sequence | MAKRGTRIAA FFLIVLLIGG VIGAAGKDIA KGISLGLDLR GGFEILYEVK PAKKGDKIDR
DVLVSTVGAL ENRVNVLGVS EPNIQIEGQD RIRVQLAGVQ DQQKAREMLS TQAKLTFRDV
DDNLLMDGTD LKGGGAKQTF DEQGRASVGL TLKSAEKFRA VTEKISKMPP PTNLMVIWLD
FEEGKDSYKA ESAKPNPKFL SAATVSQVFN QAEVSIVGGN FTVESAKQLS SLLNAGALPV
DLKEMYSTSV GAKFGQQALE QTIFASAIGI ALIFLFMLVF YRLPGLVAVI MLGLYIFVTL
LVFNWMHAVL TLPGIAALVL GVGIAVDANI ITYERLKEEL KIGKSMMSAF RAGNHRSLAT
ILDANVTTLA AAGVLFVYGN SSVKGFATSL IVSILVGFIT NVFGTRFLLG LLVKSRYFDK
KPGYFGVKQK DIIPLTKGVV HPPTRFDRIN FVNIGHKFLI FSIVVVIAGA IILPIFKLNL
GIDFASGTRI DLQSKQAVTV ADVHKDFKEL NIDVKEENIV PTGDDNKGFA VRTLGVLSKD
EIAKTKTFFH DKYGTDPNIS TVSPTIGKEI ARNAFIAVLI ASAVIILYVS IRFRFTYALS
AVLALLHDAF VMVVMFSIFQ LEVDLTFIAA VLTIIGYSIN DSIVTFDRNR ELYKQKKRVR
DIKDLEEIVN ASIRQTLGRS INTVLTVLFP VIALLIFGSE SLRNFSFALL VGLIVGTYSS
VFVASQIWLM LENRRLKRGK NKKKVEKVES EPQV
|
|---|
| |