Gene DvMF_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3188 
Symbol 
ID7175134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp4019049 
End bp4019435 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID643541724 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_002437592 
Protein GI218888271 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.584695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAT CGTCCATCGT CGAAGGCATC CTGCGCATCG TCTCTGACGA GGCGGCGCGA 
CACGGCGCAC CCCGCATCAG CCGGGTGAAC CTTGCCGTGG GCCTTCTGGC GTGCGTCGAG 
CCGCGCACCC TGACCGCCTG TTTCGAACTG CTGGCCGAAG GGACGCCCGC CGAGGGCGCG 
CCGCTGGACG TGCAACTGCT GCCCCTGCGC GGCGTATGCC TGGCCTGCGG CGACGTGGAA 
ACCCGGAAGC GGAAATTCTC CTGCCCTTCG TGCGGCGACG ACGCCGTGCA CTGGATTGGC 
GGCAGGGAAC TGTACATCGC AAGCATAGAA GTGCCCAGCC CGGATGCCAC CGACCTTCCG 
GCAGCGGCGC AAACCACGGA AGGATAG
 
Protein sequence
MHESSIVEGI LRIVSDEAAR HGAPRISRVN LAVGLLACVE PRTLTACFEL LAEGTPAEGA 
PLDVQLLPLR GVCLACGDVE TRKRKFSCPS CGDDAVHWIG GRELYIASIE VPSPDATDLP 
AAAQTTEG