| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3163 |
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| Symbol | |
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| ID | 7175109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3989316 |
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| End bp | 3990323 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541699 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_002437567 |
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| Protein GI | 218888246 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.016437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT CGCATTCCCC GCGCCGTGAG GCGCGCGTTC TGCCTGTTCT CATCCTGCTG
CTGGCGCTTT CCACCCTGCT TGCCGGGTGC GGCGCGCGTT CGTCGTTCTT TGGCGGGCCG
GACCCCTTCG GCGAGGACAC CGTGTTCGGC CAGGGCCGCA ACAAGGCCGT GCTGATCAAC
GTCAACGGCG TCATCGACAA CCGGCCCAAG TCCGGCCTGT TCCGCGAACG CCCGGGCATG
GTGCAGGAAG TGGTGGCGCA GTTGCGCCTG GCCGCCGAAG ACCCGGACGT GAAGGCCGTC
ATCGTGGCCA TCGACAGCCC CGGCGGCGGC GTTACCGCCA GCGACGTGCT GTACCACGAG
CTGATGCGCC ACCGCGAGCG CACCGGCCAG AAGGTCGTCG CCCTGATGAT GGATACCGCC
GCCTCCGGCG GGTACTACAC CGCCCTCGCC GCCGACCGCA TCGTGGCGCA CCCCTCCACG
GTCACCGGCA GCATCGGGGT CATCTTCCTG CGGCCCGAGG TGGCCGGGCT CATGGACAAG
ATCGGCGTGC GCGCCGTGGT CAGCAAGTCC GGCGAGCACA AGGACATGGG ATCGCCCTTC
CGCGAGGGCA CCGACGAGGA ACGCGCCCTG TTCCAGTCCA TCATCGCCGA CATGAATGGC
CGCTTTCAGG GCCTTGTGCG CGAGCGCAGG CCCGCCAGCC ACGGGCACGA AGCCGCATTC
GCCGATGCGC GCATCCTCAC CGCCCGTCAG GCCCTGGCCG CAGGGTTGGT GGACCGCATC
GGCTACTTCG AGGACGCCCT GGCCGAAACC GCCAGCCTGA CCGGCACCAG CGACCTGCGC
GTGGTCACCT ATCGTCGCGA GCCCCTGCCC GGCGCCACCG AATACGCCAC CGCCACCACC
CCCGCAGGGT CGGGCCGCAT GGCGCTCATC GACCTTGGCC TGCCCGGCAT GGACGCCGCC
TCGCGCGCCG GGTTCCATTA TCTGTGGTTG CCCGAGGCCG GGATGTAG
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| Protein sequence | MSASHSPRRE ARVLPVLILL LALSTLLAGC GARSSFFGGP DPFGEDTVFG QGRNKAVLIN
VNGVIDNRPK SGLFRERPGM VQEVVAQLRL AAEDPDVKAV IVAIDSPGGG VTASDVLYHE
LMRHRERTGQ KVVALMMDTA ASGGYYTALA ADRIVAHPST VTGSIGVIFL RPEVAGLMDK
IGVRAVVSKS GEHKDMGSPF REGTDEERAL FQSIIADMNG RFQGLVRERR PASHGHEAAF
ADARILTARQ ALAAGLVDRI GYFEDALAET ASLTGTSDLR VVTYRREPLP GATEYATATT
PAGSGRMALI DLGLPGMDAA SRAGFHYLWL PEAGM
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