| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3161 |
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| Symbol | |
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| ID | 7175107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3986665 |
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| End bp | 3987474 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541697 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_002437565 |
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| Protein GI | 218888244 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.00631355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGCACCG TTCTCGGCTG CATCGGCTGC GGCAACATGG GGGCCGCCAT CCTGCGCGGT
CTTTCGGGCC GCCAGGGGCT TTCCCTGCTG GGGTACAATC CCACGCCCGC CAAGGTGCTT
GCGCTGGCTG ACGCCGGCGT GCGCGCCATG CCCGACGCCG CCACGCTGGC CGCACAGGCC
GACGTGGTGC TGCTGGGGGT GAAGCCGTAT CTGGTGCCCG ACGTGCTGCG CGCCATTGCG
CCGTCGCTCA CGCCGGGCAA GGTGGTGGTG TCCATCGCCT CCGGCGTGTC CATCGCGGCC
ATGAAGGCCG CCATTGCGGA AGCGGGCGGT CCCGAATGCC CGGTGGTGCG CGTCATGCCC
AACACCCCCG CCATGGTGGG CAAGGGCGTG TACGCGCTGT GCTTCGAAGA TCCGGCACTG
GATGTGCCCC GGCGCGATCT GGTGCGGGGC CTGTTCGAAT CCATCGGCAC GGTCATCGTG
CTGCCGGAAG CCCGGTTCAC CGCCTTCACG GCGGTGGTGG GCTGCGGCCC TGCCTACGTC
TTCTACTTCA TGGAGGCGGT GACCGAGGTG GCCGTGACGC TGGGCTTCAC CCGGCAGGAC
GCCACGGAAC TGGTCAAGGG CCTGTTCTCC GGCTCGGTGG CCCTGGCGGA GCAGTCCGGC
ACGCACCTTT CGGTGCTGCG CGAACAGGTC TGCTCCCCCG CAGGCAACAC CATCGCCGCC
ATGAACCAGC TGGACCGCGA GGCCGTGCGG GGCCGCATCA TGGATGCGGT GCTGGCGGCC
TACAGGCGCG GGCTGGAAAT GGAGAAGTAG
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| Protein sequence | MGTVLGCIGC GNMGAAILRG LSGRQGLSLL GYNPTPAKVL ALADAGVRAM PDAATLAAQA
DVVLLGVKPY LVPDVLRAIA PSLTPGKVVV SIASGVSIAA MKAAIAEAGG PECPVVRVMP
NTPAMVGKGV YALCFEDPAL DVPRRDLVRG LFESIGTVIV LPEARFTAFT AVVGCGPAYV
FYFMEAVTEV AVTLGFTRQD ATELVKGLFS GSVALAEQSG THLSVLREQV CSPAGNTIAA
MNQLDREAVR GRIMDAVLAA YRRGLEMEK
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