| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3160 |
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| Symbol | ndk |
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| ID | 7175106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3986241 |
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| End bp | 3986660 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643541696 |
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| Product | nucleoside diphosphate kinase |
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| Protein accession | YP_002437564 |
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| Protein GI | 218888243 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0105] Nucleoside diphosphate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.00622384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCCGAGC GCACCTTTTC GATCATCAAG CCCGACGCCG TGGAACGCAA CCTGTCCGGC
GCCATCCTGA AGATGATTCA GGACAGCGGG CTGAAGGTCG TCGCCATGAA GATGATCCAC
CTCACCCGCA GCCAGGCCGA AGGCTTCTAC GCCGTGCACC GCGAGCGTCC CTTCTTTGAC
AGCCTGGTCA CCTACATGTG CTCCGGCCCG GTGGTCTGCT CCGTGCTCGA AGGCGACAAC
GCCATCCAGC GCTACCGCGA CCTGATGGGC GCCACCAACC CGGCCAACGC GGCCGAAGGC
ACCATCCGCA AGACCTATGC CGTCAGCATC GAGGCCAATT CCGTGCACGG TTCCGACGCG
CCCGAAACGG CTGCGTACGA AATCGCGTAC TTCTTCAACG CTCTGGAGAT GGTAGGGTAG
|
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| Protein sequence | MAERTFSIIK PDAVERNLSG AILKMIQDSG LKVVAMKMIH LTRSQAEGFY AVHRERPFFD
SLVTYMCSGP VVCSVLEGDN AIQRYRDLMG ATNPANAAEG TIRKTYAVSI EANSVHGSDA
PETAAYEIAY FFNALEMVG
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