Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3152 |
Symbol | |
ID | 7175098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3977022 |
End bp | 3977837 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643541688 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_002437556 |
Protein GI | 218888235 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.0865808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTC TTGTGCTACT GGCCGTGGCC CTGTGCGTGG TGCTTACCGG CACCATGGCT CACGCGGGCA AGATCGAGGA CATCAAGGCC CGCGGCGCGC TCGTCTGCGG CGTCAAGGAC TCTACCGTGC CCTTCGGGTA TATCGACGAG CAAAGCAAGC AGATCGTCGG TTTCGACATC GACATCTGCA AGGCCGTCGC CGACAAGCTG GGCGTGAAGC TGGAACTGAA GACCGTCACC AGCGCCACCC GCATCCCCAT GCTGACCCAG GGCTCCGTGG ACATGGTGGC CGCCACCATG ACCCACAAGT TCGAGCGTGA CGACGTCATC GACTTCTCCA TCACCTACTT CATGGACGGC CAGAAGCTGC TGGTGAAGAA GGGCGGCGGC GTGAAGAGCG CGGCGGACCT GAAGGGCAAG AAGGTCGCCA CCGCCAAGGG CTCCACCTCC GAAAAGAACA TCAAGGCCGC CCAGCCCGAG GCCACCGTGG TCTCCTTCGA CGAGTACCCG CAGGCGTTCC TGGCCCTCAA GCAGGGCAAG GCCGAAGCCG TCACCACCGA CTCCACCATC CTGCTCGGCC TGCGCAATTC CGACCCCGAG CCCGACAAGT GGGAAATCGT GGGCGACTAC ATCTCGCCCG AACCCTACGG TCTGGGCCTT GCCGAAAACG ATTCCAAGTT CCGCGACCTG GTCAACCGCA CCCTGGTGGA CCTGTGGAAT TCCGGCGAAT ACGTGAAGCT TTACGACAAG TGGTTCGGCA AGGACACCAA GTACTACCTG CCGCTCACCT GGAAGATGGA AACCTGGCCC TACTAG
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Protein sequence | MKRLVLLAVA LCVVLTGTMA HAGKIEDIKA RGALVCGVKD STVPFGYIDE QSKQIVGFDI DICKAVADKL GVKLELKTVT SATRIPMLTQ GSVDMVAATM THKFERDDVI DFSITYFMDG QKLLVKKGGG VKSAADLKGK KVATAKGSTS EKNIKAAQPE ATVVSFDEYP QAFLALKQGK AEAVTTDSTI LLGLRNSDPE PDKWEIVGDY ISPEPYGLGL AENDSKFRDL VNRTLVDLWN SGEYVKLYDK WFGKDTKYYL PLTWKMETWP Y
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