| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3116 |
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| Symbol | |
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| ID | 7175062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3932496 |
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| End bp | 3934916 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643541652 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_002437520 |
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| Protein GI | 218888199 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.00162037 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCCAGC GGATGCGTTT CAGCACCAAA TTCTACCTGG GCAGCGCCGT CATCGTGGCG
AGCACCGTGG CCTTCATGGC CATCGTGCTC ACCATCGTCG TGCGGGGCGA CCTGGTGGAC
CTCGGGCAGC TCAACCTGAA GTCCGCCACG GACAATCTTG TCTCCACCAT CGAGATGCAG
CACGCCATCA CGCAGGAAAA GGTCACCTCC GACCTTGCGC TGTTCGAATC GCAACTGCTG
GCAGATGGCC CGCTGATGGT GCGCAAGAAC GACGTGCAGA AGGTCGACGT GGTCAACCAG
CTCACCCGGC AGAAGGAAAC GGTCGAAATG CCCGGCCTGT TCCAGTATTC CCTGCTTGGC
CGCAAGCCCA TGCGCGACAA CAACGAGGTG GTCGACCGCG TGCAGCAGAT GGCGGGCGGC
GCCGCCACCC TGTTCCAGGT GCTGCCCGGC AAGCTGGTGC GCATTGCCAC CAACGTGCGC
ACGGCGGACG GCCAGCGCGC CGTGGGTACC TATATTCCGG AAGACAGCCC CGTCTACAAG
GCGGTCATGG GGGGGCAGAC CTACTCTGGC CGCGCCTTCG TGGTGAACGA CTGGTACATT
ACCGCCTACA AGCCCGTGCG CGACGAAGAC GGGACCATCA TCGCCGTCAT TTTCGTGGGC
CGCCCCATCC GCACGCCGCA GCTTGTCGAA ATGATGGACA AGGTGCGCGT GGCCGGTGCG
GGCTACGCCT TTGTCTACGA CGCCTCGGGC ATGATTCTCC ACCATCCCAC GCTGCGCGGC
AAGACGCTTG AAGAGGCGGA CATCGGCCCC TTCTTCAAGG GCGTGAAGGA TGGCCCCGTG
GACTATACCA TGGACGGCGT GCCCATGCGC GCCTACGTGC GCCATTTCGA ACCGTGGGAC
TGGCGCGTGG CCGTGCGCAT GACCCGCACG GAAATGGTGC ACGGGCTGGA TGCGCACCTC
TTGCAGAGCG CCGCCGTCAT CGCCGTGGTG GCGCTGGGTG TGGCCCTGGT CTTCGTGTTC
GGCCTGCTGC GCACCGTGTC GCGCCCGCTG GGCACCCTGC GCCGCTTCAC GGCGGAAGTG
GCCAAGGGCA ACTACGACGC GGCCATCGAC TACCTGGCCG ACGACGACAT CGGGCGCACC
ATCGGCGGCG TGCGGGCCAT GGTGGCCGAG ATCAAGCACC GCCTGGGCTT TTCCAACGGC
ATCCTGCGCG GCATGACCAT GCCGAGCTAC GTGGTGGATA CCGATGGCCG CATCAGCTAC
GTGAACCAGG CCATGCTGGA CCTGCTGGGG GTTTCCGGCA CGCCGGACGA ACACCTGGGC
GCCGACGTTG CCCTGTTCTT CTACGGCGAG GCCGGGCGCG ACACCGTGGT TGGCCGCTGC
ATGCGCGAAC GCCGGGCCAT CCTGAACACG GAACTGACCC TGTCCCGCCG CACCGGCGGC
ACCGTGCATG CCCGTCTGGA TACCGCGCCC CTGCTGGACC TGGACGGCAA CCTCATCGGC
GCCTTCTCCA TCTTCGCCGA CCTGACGGAC ATCAAGGCCC ACCAGCAGGA AATGGAAGCC
AAGAACACCC TCATCAGCGA GGTGGCCGTC GAGGCGGATC GCATCTCCCA GGTGGTGGCA
GAGGCCGCCG CCGGGCTGGC CCGCCAGGTG GAACTGGCCG AGCGCGGGGC CGACGTGCAG
AAGGCCCGCG CTGGCGAGGC CGCCAGCGCC ATGGACCAGA TGAACGCATC GGTGGTCGAG
GTGGCCCGCG CCGCCGACGA GGCCGCCGCC AGCGCCGACG AAGCCCGCGC AAAGGCCGAG
GACGGCGCCT CCATCACCCG CGAGTCCGTG GCCGCCAGCA CCGCCGTGGC CGCCGACGCA
GAGGCCCTGC GCACCGACAT GCGCGAACTG GGCACGCAGG TGGAGGGCAT TGGCCGGATC
ATGGACGTGA TTTCCGACAT CGCCGACCAG ACCAACCTGC TGGCCCTGAA CGCCGCCATC
GAGGCGGCCC GCGCCGGTGA CGCCGGACGC GGATTCGCCG TGGTGGCCGA CGAGGTGCGC
AAGCTGGCCG AAAAGACCAT GGGCGCCACC CGCGAGGTGG GCGAGGCCGT CACGCGCATC
CGCGCCGGGG CCGCCCGCAA CCTGGAGGCC ACGGAAAACG CCGCCCGCAA CGTGGGCCGC
TCCGCAGAAC TGGCCGGGGC CTCCGGCCAG ACCCTGCAGC ACATCGTCAC CATTGCCGTG
ACAACCGCCG ACCGGGTGCG GGCCATTGCC ACCGCCGCAT CCCAGCAATC CGCCGCCAGC
GAGGAAATCA GCCGGGCCAC CGGCGAGGTG GACCGCATCT CCGGCGAGAC GGTGGACGCC
ATGCGCGAGG CAGCTCGGGC CGTGGCCGCG CTGGCGGAGC AGGCGGAGGC GCTGCGCGCC
GTCATGGCAC GCATGCGCTG A
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| Protein sequence | MFQRMRFSTK FYLGSAVIVA STVAFMAIVL TIVVRGDLVD LGQLNLKSAT DNLVSTIEMQ
HAITQEKVTS DLALFESQLL ADGPLMVRKN DVQKVDVVNQ LTRQKETVEM PGLFQYSLLG
RKPMRDNNEV VDRVQQMAGG AATLFQVLPG KLVRIATNVR TADGQRAVGT YIPEDSPVYK
AVMGGQTYSG RAFVVNDWYI TAYKPVRDED GTIIAVIFVG RPIRTPQLVE MMDKVRVAGA
GYAFVYDASG MILHHPTLRG KTLEEADIGP FFKGVKDGPV DYTMDGVPMR AYVRHFEPWD
WRVAVRMTRT EMVHGLDAHL LQSAAVIAVV ALGVALVFVF GLLRTVSRPL GTLRRFTAEV
AKGNYDAAID YLADDDIGRT IGGVRAMVAE IKHRLGFSNG ILRGMTMPSY VVDTDGRISY
VNQAMLDLLG VSGTPDEHLG ADVALFFYGE AGRDTVVGRC MRERRAILNT ELTLSRRTGG
TVHARLDTAP LLDLDGNLIG AFSIFADLTD IKAHQQEMEA KNTLISEVAV EADRISQVVA
EAAAGLARQV ELAERGADVQ KARAGEAASA MDQMNASVVE VARAADEAAA SADEARAKAE
DGASITRESV AASTAVAADA EALRTDMREL GTQVEGIGRI MDVISDIADQ TNLLALNAAI
EAARAGDAGR GFAVVADEVR KLAEKTMGAT REVGEAVTRI RAGAARNLEA TENAARNVGR
SAELAGASGQ TLQHIVTIAV TTADRVRAIA TAASQQSAAS EEISRATGEV DRISGETVDA
MREAARAVAA LAEQAEALRA VMARMR
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