Gene DvMF_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3060 
Symbol 
ID7175006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3862256 
End bp3864235 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content69% 
IMG OID643541597 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002437465 
Protein GI218888144 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.471114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG GCCTTCTCGC GGCCAGTGTG GCTGCCCTGG TGCCGCTTGT ATCCGGCACG 
TTTTCCGTAT CGCACGGCAT CGCCACTTTG GCGGTGGCAT GCATCGCCGC AGTCGGCATG
CTGGTGTGCC GTACACGCGG GCAAGCCGCC GACGCACGCC TGCTGCACGA TGCAGCGCTG
AAAGGCCTCG GCCCCGCCGC CGAAGGCACG CCCGCCGCCA TGGCCGAAGC CGCCGCCGTC
ATCGCCGCCC TGCGCGACGA GGCGCTGCGC AATGCCGCCG CCGGGCAGGC CATGCTGGAA
GCCCTTGATG GGGAGGCTGG ACAGAGTGGA CAGGCAAGGC AAAGTGGGCA GGCTGGCCCC
GATGCCGCCA ATCACCCGGA CGATGCCGTC CCCTACCTGC TGCTGGACGC CAAGGGCATG
GTCACCTGCG CCTCGCCGGC CCTGCTGGCC CTGCTCGACA CAGGCACCAC AGCACCCGTC
GCCCTTCCCG GAACCCTTGA CGCCATGGGA CTGCGTCCCG CCCCCACGGA CAAAGCCGGA
ACGGAACTGC TGCGCAACCT CCGCGAGTGC CGCGCCGCCA AGGGCGAACT GGTCATCCCC
CTGGCCTGCG GGACAACGGG CAACGGCGCG GGCTCCGGCG CATCCTGCCT GATCCACCTT
GCGGTGTCTG CCCGCCCCAT CACCGACACC GCGGGCCGCG CCCACGGCAG CTTCGTGTTG
CTGCGCAACA TGACCCGGCT GCGCGCTGCG CAGTGTACCC TGGCCAGCAC GTCGTCGCGC
ATCGAACGCT TTGCCGCCGA TTCCATGTCG GCGGCTGGCG AAGTGACCCG CGCCGCAGAA
GACCTGGCCA CCCTGATCCA GGAAGCCAAC GCGGGGGCGG GCAGCCAGCA GGAGCGCACG
GCGGAAACCG CCACCGCCAT GGAGCAGATG AACGCCACGG TCATGGAAGT GGCCCGCAAC
GCGGCCCACG CCGCCGACCA GGCCGCCGAA ACCCGCCGCC GCAGCATGGA TGGCGCCCGG
CAGGTGAACG AACTGGTGGC GCACATCGAC GGCGTGGAGC AGGTCATCGG CCAGCTGGCA
GAACGCGTGG GCGCGCTGGA CACGCAGGCG GGCAACATCG GCCAGGTGAT GAACGTCATT
TCCGACATCG CCGACCAGAC CAACCTGCTG GCGCTGAACG CCGCCATCGA AGCTGCCCGC
GCCGGTGACG CCGGGCGCGG ATTCGCCGTC GTCGCCGACG AAGTGCGCAA GCTGGCCGAA
AAGACCATGA ACGCCACCCG AGAGGTGAGC GAGGTGATTA CCGGCATCCA GCAAAGCTCG
CGCGCAGCCG CCCGCGAGAT GGACGGAGCC CGCGCCGCCG TCAACGAGGC CGCCCGCCGC
GCCCAGGATT CCGGCACCGC GCTGTCGGAA ATCCTTGCCC TTACCGACAA CACCAGCATC
CAGGTGCAGT CCATCGCCAC CGCCGCAGAG CAGCAGTCGG CCACATCCGC CGAGATCAAC
CGCGCGGTGG AGGCCATCAC CGGCATTGCC GGGCGCACCA TGGACATGAT GAACCATGCC
GCGCAGGACA TCTTCAGCCT GGCCGGGCGT TCCAGCGACC TTTCGCGCAC CGTCGCGCGC
ATTACCGCCA CCGACGAAGC CGACGACGCG ACCGAAGCCG CCATGGCGGG CAAGGCCGTG
CCCTGCTGGG AATTCAAGAA GTGCGGACGC GAAAAGGGCG GCGCCAAGGA AAGGGAAATG
GGCATCTGCC CCGCCTGGCC CGACCACGGC TTCAGCTGTG CCGGGGTTAC CGGCACCTTC
TGCGGCGGCA GCATCCAGGA AACCTTTGCC AAGAAGATCG GCAACTGCGC CAAGTGCGAC
TTCTTCAAAA GCGCTTCCTA CCGGCGCGAC GCCCACGATT CGCAAATGTC CGGCGGCACG
TCCGGCGGAG CATTGGGCGG CACGTTGGGC AGGGGCGTGC GACTGGAACT GCGGCGCTAG
 
Protein sequence
MATGLLAASV AALVPLVSGT FSVSHGIATL AVACIAAVGM LVCRTRGQAA DARLLHDAAL 
KGLGPAAEGT PAAMAEAAAV IAALRDEALR NAAAGQAMLE ALDGEAGQSG QARQSGQAGP
DAANHPDDAV PYLLLDAKGM VTCASPALLA LLDTGTTAPV ALPGTLDAMG LRPAPTDKAG
TELLRNLREC RAAKGELVIP LACGTTGNGA GSGASCLIHL AVSARPITDT AGRAHGSFVL
LRNMTRLRAA QCTLASTSSR IERFAADSMS AAGEVTRAAE DLATLIQEAN AGAGSQQERT
AETATAMEQM NATVMEVARN AAHAADQAAE TRRRSMDGAR QVNELVAHID GVEQVIGQLA
ERVGALDTQA GNIGQVMNVI SDIADQTNLL ALNAAIEAAR AGDAGRGFAV VADEVRKLAE
KTMNATREVS EVITGIQQSS RAAAREMDGA RAAVNEAARR AQDSGTALSE ILALTDNTSI
QVQSIATAAE QQSATSAEIN RAVEAITGIA GRTMDMMNHA AQDIFSLAGR SSDLSRTVAR
ITATDEADDA TEAAMAGKAV PCWEFKKCGR EKGGAKEREM GICPAWPDHG FSCAGVTGTF
CGGSIQETFA KKIGNCAKCD FFKSASYRRD AHDSQMSGGT SGGALGGTLG RGVRLELRR