Gene DvMF_3060 details

Gene Information

• Locus tag: DvMF_3060
• ID: 7175006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 3862256
• End bp: 3864235
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643541597
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002437465
• Protein GI: 218888144
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 71
• Fosmid unclonability p-value: 0.471114
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCACCG GCCTTCTCGC GGCCAGTGTG GCTGCCCTGG TGCCGCTTGT ATCCGGCACG 
TTTTCCGTAT CGCACGGCAT CGCCACTTTG GCGGTGGCAT GCATCGCCGC AGTCGGCATG 
CTGGTGTGCC GTACACGCGG GCAAGCCGCC GACGCACGCC TGCTGCACGA TGCAGCGCTG 
AAAGGCCTCG GCCCCGCCGC CGAAGGCACG CCCGCCGCCA TGGCCGAAGC CGCCGCCGTC 
ATCGCCGCCC TGCGCGACGA GGCGCTGCGC AATGCCGCCG CCGGGCAGGC CATGCTGGAA 
GCCCTTGATG GGGAGGCTGG ACAGAGTGGA CAGGCAAGGC AAAGTGGGCA GGCTGGCCCC 
GATGCCGCCA ATCACCCGGA CGATGCCGTC CCCTACCTGC TGCTGGACGC CAAGGGCATG 
GTCACCTGCG CCTCGCCGGC CCTGCTGGCC CTGCTCGACA CAGGCACCAC AGCACCCGTC 
GCCCTTCCCG GAACCCTTGA CGCCATGGGA CTGCGTCCCG CCCCCACGGA CAAAGCCGGA 
ACGGAACTGC TGCGCAACCT CCGCGAGTGC CGCGCCGCCA AGGGCGAACT GGTCATCCCC 
CTGGCCTGCG GGACAACGGG CAACGGCGCG GGCTCCGGCG CATCCTGCCT GATCCACCTT 
GCGGTGTCTG CCCGCCCCAT CACCGACACC GCGGGCCGCG CCCACGGCAG CTTCGTGTTG 
CTGCGCAACA TGACCCGGCT GCGCGCTGCG CAGTGTACCC TGGCCAGCAC GTCGTCGCGC 
ATCGAACGCT TTGCCGCCGA TTCCATGTCG GCGGCTGGCG AAGTGACCCG CGCCGCAGAA 
GACCTGGCCA CCCTGATCCA GGAAGCCAAC GCGGGGGCGG GCAGCCAGCA GGAGCGCACG 
GCGGAAACCG CCACCGCCAT GGAGCAGATG AACGCCACGG TCATGGAAGT GGCCCGCAAC 
GCGGCCCACG CCGCCGACCA GGCCGCCGAA ACCCGCCGCC GCAGCATGGA TGGCGCCCGG 
CAGGTGAACG AACTGGTGGC GCACATCGAC GGCGTGGAGC AGGTCATCGG CCAGCTGGCA 
GAACGCGTGG GCGCGCTGGA CACGCAGGCG GGCAACATCG GCCAGGTGAT GAACGTCATT 
TCCGACATCG CCGACCAGAC CAACCTGCTG GCGCTGAACG CCGCCATCGA AGCTGCCCGC 
GCCGGTGACG CCGGGCGCGG ATTCGCCGTC GTCGCCGACG AAGTGCGCAA GCTGGCCGAA 
AAGACCATGA ACGCCACCCG AGAGGTGAGC GAGGTGATTA CCGGCATCCA GCAAAGCTCG 
CGCGCAGCCG CCCGCGAGAT GGACGGAGCC CGCGCCGCCG TCAACGAGGC CGCCCGCCGC 
GCCCAGGATT CCGGCACCGC GCTGTCGGAA ATCCTTGCCC TTACCGACAA CACCAGCATC 
CAGGTGCAGT CCATCGCCAC CGCCGCAGAG CAGCAGTCGG CCACATCCGC CGAGATCAAC 
CGCGCGGTGG AGGCCATCAC CGGCATTGCC GGGCGCACCA TGGACATGAT GAACCATGCC 
GCGCAGGACA TCTTCAGCCT GGCCGGGCGT TCCAGCGACC TTTCGCGCAC CGTCGCGCGC 
ATTACCGCCA CCGACGAAGC CGACGACGCG ACCGAAGCCG CCATGGCGGG CAAGGCCGTG 
CCCTGCTGGG AATTCAAGAA GTGCGGACGC GAAAAGGGCG GCGCCAAGGA AAGGGAAATG 
GGCATCTGCC CCGCCTGGCC CGACCACGGC TTCAGCTGTG CCGGGGTTAC CGGCACCTTC 
TGCGGCGGCA GCATCCAGGA AACCTTTGCC AAGAAGATCG GCAACTGCGC CAAGTGCGAC 
TTCTTCAAAA GCGCTTCCTA CCGGCGCGAC GCCCACGATT CGCAAATGTC CGGCGGCACG 
TCCGGCGGAG CATTGGGCGG CACGTTGGGC AGGGGCGTGC GACTGGAACT GCGGCGCTAG 

 

Protein sequence

MATGLLAASV AALVPLVSGT FSVSHGIATL AVACIAAVGM LVCRTRGQAA DARLLHDAAL 
KGLGPAAEGT PAAMAEAAAV IAALRDEALR NAAAGQAMLE ALDGEAGQSG QARQSGQAGP 
DAANHPDDAV PYLLLDAKGM VTCASPALLA LLDTGTTAPV ALPGTLDAMG LRPAPTDKAG 
TELLRNLREC RAAKGELVIP LACGTTGNGA GSGASCLIHL AVSARPITDT AGRAHGSFVL 
LRNMTRLRAA QCTLASTSSR IERFAADSMS AAGEVTRAAE DLATLIQEAN AGAGSQQERT 
AETATAMEQM NATVMEVARN AAHAADQAAE TRRRSMDGAR QVNELVAHID GVEQVIGQLA 
ERVGALDTQA GNIGQVMNVI SDIADQTNLL ALNAAIEAAR AGDAGRGFAV VADEVRKLAE 
KTMNATREVS EVITGIQQSS RAAAREMDGA RAAVNEAARR AQDSGTALSE ILALTDNTSI 
QVQSIATAAE QQSATSAEIN RAVEAITGIA GRTMDMMNHA AQDIFSLAGR SSDLSRTVAR 
ITATDEADDA TEAAMAGKAV PCWEFKKCGR EKGGAKEREM GICPAWPDHG FSCAGVTGTF 
CGGSIQETFA KKIGNCAKCD FFKSASYRRD AHDSQMSGGT SGGALGGTLG RGVRLELRR