Gene DvMF_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3007 
SymbolthiE 
ID7174951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3794425 
End bp3795066 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content73% 
IMG OID643541542 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002437412 
Protein GI218888091 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones116 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGA ATGCGGATTA CGGGGTGTAT CTGGTGACCG ACCGCACGCT GTGCCGGGGC 
CGCGCCCTGA CCGACGTGGT GACCGCGGCG GTGGCGGGCG GCGTGACAGT GGTGCAGTTG 
CGCGAAAAGC ACGTGGACAC GCGCGAGTTC GTGGAACTGG CCCGCGCTCT GAAGGCGCTG 
CTGGCCCCGC GCGGCGTGCC CCTGCTGATC AACGACCGGG TGGACGTGGC TCTGGCCTGC 
CAGGCCGACG GCGTGCACGT GGGGCAGGGC GACATGCACC CCGCCGACGT GCGTGCGTTG 
CTAGGGCATT CGGCCCTTGT CGGGCTGTCC GTGGAGACCA TGGATCAGGT GCGCGAGGCG 
GAAACGCTGG ATGTGGACTA TCTGGGGGTG AGCCCGGTGT TTGCCACGGC CACCAAGACG 
GATACCGCGC CGCCGTGGGG GCTGGACGGG CTGGCCCGGT TGCGCGCCGC CACGGGGCGC 
ACGCTGGTGG CCATCGGCGG CATCGGCCCG GCCAACGCAG CCTCGGTGCT GGCGGCTGGG 
GCCGACGGCC TGGCTGTGGT CTCTGCCCTG TGCGCGGCGG ATGACCCGGG ACGGGCGGCG 
GAGGAACTGC GCGGATCGGT GCGCGCCGTG CGCGGCTGGT AG
 
Protein sequence
MRRNADYGVY LVTDRTLCRG RALTDVVTAA VAGGVTVVQL REKHVDTREF VELARALKAL 
LAPRGVPLLI NDRVDVALAC QADGVHVGQG DMHPADVRAL LGHSALVGLS VETMDQVREA 
ETLDVDYLGV SPVFATATKT DTAPPWGLDG LARLRAATGR TLVAIGGIGP ANAASVLAAG 
ADGLAVVSAL CAADDPGRAA EELRGSVRAV RGW