Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3003 |
Symbol | |
ID | 7174947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3790053 |
End bp | 3791237 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643541538 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_002437408 |
Protein GI | 218888087 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 108 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTG CCCAGCGCAT GGAAAGTGTG CCCCGTTCCT ACATCCGCGA AATCCTGAAG GTGACGGCGC AACCGGACAT CATTTCCTTT GCAGGGGGGC TGCCGCACCC GGCGTCGTTC CCGGTGGACG CGGTGGCCAG CGCGGCGGCC AGCGTGCTGG AGGAAGCCGG GCCGGAAGCC CTGCAATACA CCACCACCGA GGGCTTTCCG CCTCTGCGCC AGTGGATTGC CGACCGCTAC AAGCGGCAGG GCATCAATGT CTCGCCCGAC GACATCCTGA TCACCACCGG CTCGCAGCAG GCCCTGGACC TGGTGGCCAA GGCGTGCATC GACCGGGGCG GCAGGGTGGT CATGGAGCGT CCCGGCTACC TGGGGGCCAT CCAGTGCTTC TCGGTGTTCG GCCCGGACTT CGTCACCGTG CCCCTGACCC CGCGCGGGGT GGATACGGAT GCCTTGCGCA AGGCTGCCAC GGGTGCGCAG GTGTTCTACG CCGTGCCCAG CTTCCAGAAT CCGTCCGGCA TCACCTATGA CGAGCAGACC CGCCGCGAGG TGGCCGAGAT CATGGCCGAA ACCGGCTGCC TGATGGTGGA GGACAACCCC TACGGCGAAC TGCGCTTCAT GGGGCAGCAC CTGCCGCCGG TGCGGGCGTA CATGCAGGCC CCCTCGGTGC TGCTGGGCTC GTTCTCCAAG GTGGTGTCGC CGGGCCTGCG CCTGGGCTGG GTGTGCGCGC CCCAGGAGGT GCTGAACCCC ATGATCACCG CCAAGCAGGC CAGCGACCTG CACACACCCG GCTTTACCCA GCGCATCCTG CACCGCTATC TCATGGACAA TGACGTGGAC AAGCACATCG CTTCCATCCG CGCCCGCTAC GGCGCCCAGC GCGACGCCAT GGTGCAGGCC ATCCGCCGGC ACTTTCCCGA GGACGTGGCC TGCACCGAGC CGGAAGGCGG CATGTTCCTG TGGTGTACCC TGCCCGAGGG CATTTCCGCC GAGGCGCTGT TCCACAAGGC CATCGAGCGC AAGGTGGCCT TCGTGCCGGG GCGTCCGTTC TACGTGGACG AGACCGACGA CACCTTCCGC CTCAACTTCT CCAACTCCAG CCCGGAACTG ATCGAAGAGG GCATCGCGCG CCTTGGGCAG TGCCTGCGCG AGTATCTGGG CAAGGGGCAG GCAGGCGCGG CGTAG
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Protein sequence | MRLAQRMESV PRSYIREILK VTAQPDIISF AGGLPHPASF PVDAVASAAA SVLEEAGPEA LQYTTTEGFP PLRQWIADRY KRQGINVSPD DILITTGSQQ ALDLVAKACI DRGGRVVMER PGYLGAIQCF SVFGPDFVTV PLTPRGVDTD ALRKAATGAQ VFYAVPSFQN PSGITYDEQT RREVAEIMAE TGCLMVEDNP YGELRFMGQH LPPVRAYMQA PSVLLGSFSK VVSPGLRLGW VCAPQEVLNP MITAKQASDL HTPGFTQRIL HRYLMDNDVD KHIASIRARY GAQRDAMVQA IRRHFPEDVA CTEPEGGMFL WCTLPEGISA EALFHKAIER KVAFVPGRPF YVDETDDTFR LNFSNSSPEL IEEGIARLGQ CLREYLGKGQ AGAA
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