Gene DvMF_2988 details

Gene Information

• Locus tag: DvMF_2988
• ID: 7174930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 3766767
• End bp: 3768821
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643541521
• Product: methyl-accepting chemotaxis sensory transducer with Cache sensor
• Protein accession: YP_002437393
• Protein GI: 218888072
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 83
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCTCGC AGAGCATTCG TACGACCATG CTCATCATCA TTGCCAGCGT TGTATTGCTG 
ATACAATCTG CGCTGGTCGT GGTGGTGGCG AAAACCGGCT ACGATGACGG ACTGGCGGAA 
AAGAAGCGTG AAATGCGCCT GATGGCCGAA ACCATTTCCA AGTCGGTGTC CGATTTCGGC 
CTGCGCCAGG TGGACATGAT GCGCGGGGCA TCGAAAGTAC CGGTGCTTCG CCAGTTCCTG 
CAAGGCGACG CATCGCTCGA AGGAGCGGCG GCAGAAGTCA TCACGGCCAT GTCCCAGGCG 
GCCCCCGGCG TGAACACCTA CTACCTGTTC AACGCGCAGG GCAGCCAGGT CATCCTGCGT 
GCCCAGGGCA AGCCGGGCAA GCCGAACAAC CTGGCCGACC GCGAATACAT CAAGGCCGCG 
CTGTCCGGAA AGGAAGGCTA CAGTTCATCC CCCACCAAGA GCCTGGCCAC CGGCAAGCTC 
ATCATCAGCG TCACCGCCCC CATCTTCGAC GATTCGGGCC GGGTGCTGGG CGGCGTGGGC 
ATGTCCTACG CCATTGACGG ACTGGTGGAA AACTACATTG ACTCCGTAAA GATCGGCGAT 
ACCGGTCGCC CCTTCTTTCT TTCGCCCAAG GGGGTGGTCA TCGGCCACCC GGATGATTCC 
ATGATCCTCA AGGACATTTC CGCCAATCCC GGCGTTGCCG GGATGATCGC CGCAGCCAAT 
GGCCAGAACG CCGTCACCCG TGATGGCCGC GAGATCATGC TCACCTGGAC CCGCGTGCCC 
AACTGGAACT GGATCCTGGG CATTTCCATG GACATGGACG AAATCGCCGC TCCCGCCGTG 
GCCCAGCGCA ACTACATGAT CGCCATGGGC ATCGCCGCCA TCGTGGCGCT GATCGGGGTC 
TGCCTGTTCG CCCTCGACCG CATCGCCGTG CGCCCCATCA AGAAGCTGGA AGGCTACGCC 
TCCACCGTGG CGGCGGGCAA CCTGGACGAC ACCCTGGAGC TTGCGCAGCG CAACGAGATC 
GGCAAGCTGG CCGACAGCCT GCGCACCATG GTGGCCAGCC TGAAGGGCAA GATCGCCGAG 
GCCGACGAAA AGACCCGCAT GGCCAACGAG GAGTCGGAAC GTGCCGCCAG GGCGGGGCGC 
GAGGCGGAAG AGGCCCGCGC CGCCGCCGAA CGCGCCCGCG CAGAAGGCAT GCTGCAAGCC 
GCCGCCAAGC TGGAGAGCGT GGTGGAAATC GTCACCTCCG CCTCCGAGGA ACTGTCCGCC 
CAGGTTGAGC AGTCCAGCAG GGGCGCGGAA AGCCAGAGCG CCCGCGTGGG CGAAACGGCC 
ACCGCCATGG AGGAAATGAA CGCCACGGTG CTGGAAGTGG CCCGCAACGC CTCGCAGGCA 
GCCGAATCTG CCGAAAACGC CAAGGGCAGG GCCGAAAGCG GCGCCACCCT GGTCACAGAC 
GTGGTGCGCA GCATCGCCGA GGCCCAGACC CAGGCGCTGT CCCTCAAGGC CGACATGCAG 
AGCCTGGGCA CGCAGGCCGA GGGCATCGGC CAGGTCATGA ACGTGATCAC CGACATCGCC 
GACCAGACCA ACCTGCTGGC GCTGAACGCG GCCATCGAGG CGGCCCGCGC CGGGGATGCC 
GGGCGCGGAT TCGCCGTCGT CGCCGACGAG GTGCGCAAGC TGGCCGAAAA GACCATGAAC 
GCCACGCGCG AGGTGGGCGA CGCCATCCGC AACATCCAGC ACGGCACCCG CCGCAACATC 
GACAACGTGG AGCAGGCGGT GCAGCTCATC GACAATGCCA CCGGCCTCGC CAACAAGTCG 
GGCGATGCGC TGCACTCCAT CGTGCAACTG GTGGACGTGA CCTCGGAGCA GGTGCGCTCC 
ATCGCCACGG CGGCGGAACA GCAGTCCGCC ACCAGCGAGG AGATCAATCA TTCCATCGAG 
GACATCAGCC GCATTTCTGG GGAAACTTCC GACGCCATGC GCCAGTCGTC CGTGGCCGTC 
ACCGAACTGG CCCGCCAATC GCAGGAAATG AAGTCCGTCA TCGACGGCAT GAAGCGCGAG 
GCCACGGCCG CGTAA 

 

Protein sequence

MVSQSIRTTM LIIIASVVLL IQSALVVVVA KTGYDDGLAE KKREMRLMAE TISKSVSDFG 
LRQVDMMRGA SKVPVLRQFL QGDASLEGAA AEVITAMSQA APGVNTYYLF NAQGSQVILR 
AQGKPGKPNN LADREYIKAA LSGKEGYSSS PTKSLATGKL IISVTAPIFD DSGRVLGGVG 
MSYAIDGLVE NYIDSVKIGD TGRPFFLSPK GVVIGHPDDS MILKDISANP GVAGMIAAAN 
GQNAVTRDGR EIMLTWTRVP NWNWILGISM DMDEIAAPAV AQRNYMIAMG IAAIVALIGV 
CLFALDRIAV RPIKKLEGYA STVAAGNLDD TLELAQRNEI GKLADSLRTM VASLKGKIAE 
ADEKTRMANE ESERAARAGR EAEEARAAAE RARAEGMLQA AAKLESVVEI VTSASEELSA 
QVEQSSRGAE SQSARVGETA TAMEEMNATV LEVARNASQA AESAENAKGR AESGATLVTD 
VVRSIAEAQT QALSLKADMQ SLGTQAEGIG QVMNVITDIA DQTNLLALNA AIEAARAGDA 
GRGFAVVADE VRKLAEKTMN ATREVGDAIR NIQHGTRRNI DNVEQAVQLI DNATGLANKS 
GDALHSIVQL VDVTSEQVRS IATAAEQQSA TSEEINHSIE DISRISGETS DAMRQSSVAV 
TELARQSQEM KSVIDGMKRE ATAA