Gene DvMF_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2956 
Symbol 
ID7174898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3728452 
End bp3729744 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID643541489 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002437361 
Protein GI218888040 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.232515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA AGATCATCAT CGGCCTCGCC ATCGCCCTCG CCGTGGCCCT GATTGCCGCC 
TACTTCCTCT CGCGGCGCGA AGGCCGCACC GAAATCACCC AGACCGCCAC CGTCAGCCGG
GCCACCGTGC GCAAGGTGCT GGACGCCACG GGCATCATCA AGCCCGAGGT GGGCGCCATC
GTGAAGACCG GCACCCGGTT CACCGGCATC ATCCGCACCA TGCACGTCAA GGTGGGCGAC
GCGGTGAAGG CCGGGCAGAT CATCGCCGAA ATCGACGACC GCGAGCAGCG CGCCCAGCAG
GACCAGGCCG AGGCCACCCT GCGCAAGGCC CAGTCCGAGC TTGCCCGCGT GGAGGCCTCG
TACCCCCTGC AAATCCGCGA GGCGGAAGCC CAGATGGCCG CCGCGCAGGC CGACTACGAC
TACGCCGCCC TGAACCTGAA ACGCCGCCGC ACCTTGGTGG AGCAGGATCT GGACGCCCGC
AACACCCTGG ACGAGGCGAA GCAGCAATCG GAAACCACCG GCAACACCCT GGCCGCGCGC
AAGGCCACCC TGGACCGCCT GCAACGCGAA TCGACGCTGG CCATCAAGAC CGCGCGCGAA
GCCGTGAAGG AAGCGCAATC CGCGCTGGAG GCCACCAACG TGCGCCTGTC CTATTCGGTT
ATCCGCGCCC CGCTGGACGG CGTGGTCAGC GAGGTCACGG CGCAGGGCGG CGAAACCGTG
GTGGCGGGCT TTCAGGTGGC CAACCTGATC ACCGTGCTGG ACCCCACCCG GCTGGAGATG
TGGATCTACG TGGATGAAAC CGACGTGGGC CAGATAACCC CCGGCATGAC CGTGGAATTC
CGCGTGGATT CGCTGCCCGG CCGCACCTTT GGCGGCACGG TGAACCAGAT CTACCCGCAG
CCGGAAATCC GCGACAACAT CGTGTACTAC CGGGCGCTGG TGCGCCTTAC CCCGCAGACC
TCCACCGACC TTCGGCCCGA AATGACCACC CAGTGTCGCA TCGTGGTGCA GCAGAAGGAC
AACGTGCTGG CCGTGCCCAA CGAGGCCCTG AAATGGGTGG GCGGCGAACA GGTGGTGTTC
GTGCAGGGTG ATGGCGCCAT CCGCAGGGTG CGGCCCCGCA TCGGCCTGGC CGGTGCCGAG
ACCAGCGAGG TGCTGGAAGG GCTGGCCGAG GGCGACGTGG TGGGCACCAA GGTGGTGCTG
CCCACTTCGC GCGGCGGCGG GCGCCCCGAA CAGACGCCGG GCGGTTCCGG CGGCCCGGGC
GGCGGCCCCG GCTCCGGGCG ACCGGGCAGG TAG
 
Protein sequence
MRKKIIIGLA IALAVALIAA YFLSRREGRT EITQTATVSR ATVRKVLDAT GIIKPEVGAI 
VKTGTRFTGI IRTMHVKVGD AVKAGQIIAE IDDREQRAQQ DQAEATLRKA QSELARVEAS
YPLQIREAEA QMAAAQADYD YAALNLKRRR TLVEQDLDAR NTLDEAKQQS ETTGNTLAAR
KATLDRLQRE STLAIKTARE AVKEAQSALE ATNVRLSYSV IRAPLDGVVS EVTAQGGETV
VAGFQVANLI TVLDPTRLEM WIYVDETDVG QITPGMTVEF RVDSLPGRTF GGTVNQIYPQ
PEIRDNIVYY RALVRLTPQT STDLRPEMTT QCRIVVQQKD NVLAVPNEAL KWVGGEQVVF
VQGDGAIRRV RPRIGLAGAE TSEVLEGLAE GDVVGTKVVL PTSRGGGRPE QTPGGSGGPG
GGPGSGRPGR