| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2767 |
|---|
| Symbol | |
|---|
| ID | 7174706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3500840 |
|---|
| End bp | 3502351 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643541300 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_002437174 |
|---|
| Protein GI | 218887853 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCT ATCTCATCGG CGCGGGGCCC GGCGACCCCG GCCTGCTCAC GCTCAAGGGC
AAGCGCATCC TCGAATCGGC GGACGTCATC GTCTACGACT ACCTCGCCAA CGACGCGTTC
CTCGCCTACG CCAAGCCCGG CGCGGAAATC ATCTACGTGG GCAAGAAGGG CGGCGACCAC
ACCCTGACGC AGGACGGCAT CAACCGCCTG ATCGTGGACA AGGCCAAGGA AGGCAAGACC
GTGGCCCGCC TGAAAGGCGG CGACCCGTAC ATGTTCGGGC GCGGCGGCGA AGAGGCCGAA
GAACTTCTGG ATGCGGGAGT TCCCTTCGAG GAAGTGCCCG GCGTCACCAG CGCCGTGGCC
GGTCCCGCCT ACGCGGGCAT TCCGCTGACG CACCGCTCCT ACTCCTCGTC CGTGTCGTTC
ATCACCGGGC ATGAAGACCC CACCAAGCCC GGCTCGGTGC ACAACTGGAA GGCCCTGGCC
GAAAGCGCCA GCACCCTGGT CTTCTTCATG GGCATGAAGA ACCTGCCCGA AATCTCGCGC
AAGCTCATCG AGGCGGGCAT GCCCGCTGAA ACCCCGGCTG CGCTCGTCCA TTGGGGCACC
ACCGCCCGTC ACCGCAGCCT TGTGGCCACC ATCGCCACCC TGCCGACAGA AGGGCCGAAG
CATGGCTTCA CCAATCCCTC GCTCATCGTG GTGGGCGGGG TGGTCAACCT GCACGACCGG
CTGAACTGGT TCGAGCAGAA GCCCCTGCTG GGCAAGGGCG TGGTGGTCAC CCGCGCCCGC
GAGCAGGCCA GCGGCCTTGC CGAGGCCCTG CGCGAACTGG GCGCCGACGT GGTGCAGTTT
CCCACCATCG AGATCATCCC CCTTGCCGAC TACGCCCCGG TGGACGCGGC CATCCGCGAT
CTGCCCGGCT ATGACTGGGT GGTGTTCACC TCGGTCAACG GCGTGAAGCA CTTCTGGAAC
CGCCTTGCCG CGTGCGGGCA GGATTCGCGC GCGCTGGCCG GGCGCAAGGT GGCCGCCATC
GGCCCCGCCA CCGCCGACGT GCTGCGCACC AAGGGCATCG AGCCGGACTT CATCCCCGAA
AAGTACGTGG CCGAAGGCGT GGTGGAAGGC ATGCTGGCGC GCGGCATGGG CGGCAAGCGC
GTGCTGCTGC CCCGCGCCCG AGAGGCGCGC GAGGTGCTGC CCGACGAACT GCGCAAGGCC
GGGGCCGTGG TGGACGTGCT GCCGGTGTAC GAAACCGTGC CCAGCACCGC CCGCAAGGAC
GACGTGCTGG CCCGCATGCA GGAAGGGCGC ATCCATTGCG TCACCTTCGG CTCGTCGTCC
ACGGTGGACA ACTTCTTCTC GCTGGTGCCC GTGGACATGG TGAAGGCCCA CCCCGAGGTG
AAGCTGGCCT GCATCGGCCC GGTCACCCGC AAGACGCTGG AAGGCTACGG CCTGACCTGC
CACATCCAGC CCGAGGATTT CACCATCCCC GCGCTGGTTG ACGAGTTGGT TGCGCGCCTG
CCCGAACTGT AG
|
|---|
| Protein sequence | MKVYLIGAGP GDPGLLTLKG KRILESADVI VYDYLANDAF LAYAKPGAEI IYVGKKGGDH
TLTQDGINRL IVDKAKEGKT VARLKGGDPY MFGRGGEEAE ELLDAGVPFE EVPGVTSAVA
GPAYAGIPLT HRSYSSSVSF ITGHEDPTKP GSVHNWKALA ESASTLVFFM GMKNLPEISR
KLIEAGMPAE TPAALVHWGT TARHRSLVAT IATLPTEGPK HGFTNPSLIV VGGVVNLHDR
LNWFEQKPLL GKGVVVTRAR EQASGLAEAL RELGADVVQF PTIEIIPLAD YAPVDAAIRD
LPGYDWVVFT SVNGVKHFWN RLAACGQDSR ALAGRKVAAI GPATADVLRT KGIEPDFIPE
KYVAEGVVEG MLARGMGGKR VLLPRAREAR EVLPDELRKA GAVVDVLPVY ETVPSTARKD
DVLARMQEGR IHCVTFGSSS TVDNFFSLVP VDMVKAHPEV KLACIGPVTR KTLEGYGLTC
HIQPEDFTIP ALVDELVARL PEL
|
|---|
| |