Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2703 |
Symbol | |
ID | 7174642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3419978 |
End bp | 3422101 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643541236 |
Product | hypothetical protein |
Protein accession | YP_002437110 |
Protein GI | 218887789 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.00446751 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGAAAGATA GAAAGATTTT GATTTATATT GGTGCCAACT ATGGCGATGG GCTTTGGAGT ATCTGTGATG ATTATGATGA ATGTCACGTA TTTGAAGCAG ATGCTTCATT GGTGGCATCC TTATGTGTCA GGTTTTCTTC GAAGCAGCAT GTAAGGATTA ATCATGGGTG TGTTGCTACG TGTGGCGGCA GCATTCCTTT TTTTGTTTAT GACTATAAGC CGGCTAATTC TTGCGGACAG ATTAAGCAGG GGTTCATGGA TAGCTTCGAG GGCAACGCCA AAGAGCTTTT TGGTGAAGCG CGCGAAATTC AAGTTCCCGC AATTTACCTT CCTGACTATT GCGCAGAGAA TAATATCAAG TATATCCATA CCTATTTTAG TGATATTCAA GGTATGGATC TTTCTGTATT GAAAACAATG CAAGATTTTA TCGATGGCGG CCGGATAAGT GAGATTATTT GCGAAGTGGC CAAGGACGAA CACAGGAATA TTTATTCCGG TATTCCAGAA AATTCATTTT CGAGCTTTGT TGAGCTTCTT GGGGGCGAGT ATGTGCTTGT TGCGTCTGGG TGGGATGACC TTCAAGACGG CGTGTTGAAG GGGGTCCCGG AGGGATGGTG GGAGTATAAC TGCAAGTGGA GGCATGTAGC TTCGCCTTAT AGGGATGGCC TTCATATGCG CGTTTTGGCC ATGTGCGATC TGTCGCCTGA AGCTACGGTG GAGCATCGCA ATCCTCTGGA CCTGCTCACT TCCAATAGGC TTGATATACT TGCCCGATAC GAGTTTATCA GTCGTTTTCT TTGTGGTCAG TGTGTAGATT ATGGTAAGCA TGTCTACCTT TCTGTTATTA GCGCCTGGCA CTCTTTGAGT GGAGGTTTTG ATCCTGGCAA GTTTTCAATG GATGATTATG TCCAGAGCTT TGCTGAGATG GCAATGTCGA TGCGCGAGGA CGGATTTGAT AGTGAGCGGT CTTTGATACC AATTGTCGAT GGCACGATTG TCGATGGCGC ACATCGTGTG GCTGCTGCTT TGGCGTTGGG GATCGATTCT CTTCCTTGTA TTGCTGTGCG TGGTAAGAAG CAAGATCAAT GCGAAGCGAC ATTGAAAAGG GTAGGCGTTG ATTCTGCATT GGTAGATAGT CTTATAGTGC GTCATGTTGA AATTGATGAT CGCATCCGTT TGGCTGTTTT GTTCCCCTGT GCGCATGGTT CTGTAGATGA AGCAATGGGT ATCATTGAGC GCAATGCAGA GGTCTTGTAT CGTCATTCAG TGCGTCTTAC GCGAAGGGGC CAAGAAAACT TGGCAACTCT TATTTACGGA CAGCACGATT GGTGGAGCGC CCACCATGAG GTGACCTTTG CTGGCCGTAG GTATCGGCGC AATATGGATA CACTTTTCGT TTTTTTTAGA GGATGTACTG ATGTCCTTGC CATGAAGGCA GAGGTTCGCT CTGCGGTGGG TCTGGGGAAT GACGCTATTC ATACAACGGA CACTCATTTC GAGGCCTGTG AGTTGGCTCG CCATGTCCTA AACCCAAACA GTGTCGATGC GTTGAATTAT TCACGGTCGA GTGAGCTTAA GGTCTTTCCA CGGCTGCTTG ATGTTTTTGC AACGAAGCTT CGGCAGGCTA ATGAGTGTAT TGAAAATTAC GCTATCGATT CCGGTGGTGC TTTGGCAGTT TATGGGCTTA GGGATGTAAC GGATCTTGAT TTTATATCAA CTGGCGCGAT TGAGGACATA TCGGACGGTT CAGTAGGGGT CTCCAGCCAT AATGACTTGT TCTTCAAGGC ACCATTGCGT CTTGATCTTA TTATAAATGA TCCTCGTCAT CACTTTTATT GGCACGGAAT AAAGTATGTT TCGCTTGATT TAGTGCGGTT TGTGAAGTCG TGCGATATGC ACGGTAAGAA CAAGCGGGAC ATAATGTTAA TAGATTCGCG CAAAAGGGCG ATGTCCACGC TGTATAGGTT TGTTGCTAGT GCGCTATACA GGGTGCGTTT GCGTTGTAAT GTTCGTGCGA TTATGGCTTT GGTGATTCCT GCCGGGGCTT CTTTTTTGAA AAAGGCTCTT GGGCAGGGGC GGTATGTGAT TGTTAGGGAT TTGTTTCGGA AATATTTCAG GTAA
|
Protein sequence | MKDRKILIYI GANYGDGLWS ICDDYDECHV FEADASLVAS LCVRFSSKQH VRINHGCVAT CGGSIPFFVY DYKPANSCGQ IKQGFMDSFE GNAKELFGEA REIQVPAIYL PDYCAENNIK YIHTYFSDIQ GMDLSVLKTM QDFIDGGRIS EIICEVAKDE HRNIYSGIPE NSFSSFVELL GGEYVLVASG WDDLQDGVLK GVPEGWWEYN CKWRHVASPY RDGLHMRVLA MCDLSPEATV EHRNPLDLLT SNRLDILARY EFISRFLCGQ CVDYGKHVYL SVISAWHSLS GGFDPGKFSM DDYVQSFAEM AMSMREDGFD SERSLIPIVD GTIVDGAHRV AAALALGIDS LPCIAVRGKK QDQCEATLKR VGVDSALVDS LIVRHVEIDD RIRLAVLFPC AHGSVDEAMG IIERNAEVLY RHSVRLTRRG QENLATLIYG QHDWWSAHHE VTFAGRRYRR NMDTLFVFFR GCTDVLAMKA EVRSAVGLGN DAIHTTDTHF EACELARHVL NPNSVDALNY SRSSELKVFP RLLDVFATKL RQANECIENY AIDSGGALAV YGLRDVTDLD FISTGAIEDI SDGSVGVSSH NDLFFKAPLR LDLIINDPRH HFYWHGIKYV SLDLVRFVKS CDMHGKNKRD IMLIDSRKRA MSTLYRFVAS ALYRVRLRCN VRAIMALVIP AGASFLKKAL GQGRYVIVRD LFRKYFR
|
| |