Gene DvMF_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2660 
Symbol 
ID7174598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3359874 
End bp3360719 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID643541192 
ProductFe-S cluster assembly protein NifU 
Protein accessionYP_002437067 
Protein GI218887746 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR02000] Fe-S cluster assembly protein NifU 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value0.729914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAGT ATACCGACAA GGTGCGAGAG CACTTCCTGA ACCCGCGCAA CGTGGGCTCC 
CTTGACGACG CCAACGCCAT CGGCGAGGTC GGCAGCCTTG CCTGCGGCGA CGCCCTCAAG 
CTCTATCTCA AGATCGACGG CGACCGCATC GTGGACGCCA AATTCCAGAC CTTCGGCTGC 
GCCAGCGCCA TCGCCTCCAG TTCGGCCCTG ACCGAACTGA TCAAGGGCAT GACGGTGGAG 
GAAGCCCTGA AGGTGACCAA CCGCGACATC GCCGAATTTC TGGGCGGCCT GCCCAAGGAA 
AAGATGCACT GCTCGGTCAT GGGGCAGGAA GCGCTGGAGG CCGCCATCCG CAACTGGCGC 
GGTGAACCCG CCGTGGAACA CAGCCACGAG GGCCAGCTGG TCTGCAAGTG CTTTGGCGTG 
ACCGACGAGC AGATCGTGCG CGCCATCCGC GAAAACGGCC TGAAGACCGT GGAGGAAATC 
ACCCACTACA CCAAGGCCGG CGGCGGCTGC GGCGAATGCG TGGGCGAACT GCAAAGGCTG 
CTGGACGCGG AACTGGGCAA GGCCCCGGTG TGCGAAACCC CGCTGGCCGC CGCGCCGAAA 
AAGCTCACCA ACGTGCAGCG CATGCAACTG GTCCTGAAGG TGCTGGAAGG CGAAATCCGC 
CCCCGCCTGC AACAGGACGG CGGCGACATC GAACTGGTGG ACATGGACGG CACCACCGTC 
TACGTGGCCC TGCGCGGTAT GTGCACCAGC TGTCCCTCCA GCCGCCTGAC GCTGGAAGGC 
TTTGTGGAAA AGACCCTGCG CGACCATGTG GACGAGAACA TCGTGGTCAA GGAGGCGGCA 
GCGTGA
 
Protein sequence
MWEYTDKVRE HFLNPRNVGS LDDANAIGEV GSLACGDALK LYLKIDGDRI VDAKFQTFGC 
ASAIASSSAL TELIKGMTVE EALKVTNRDI AEFLGGLPKE KMHCSVMGQE ALEAAIRNWR 
GEPAVEHSHE GQLVCKCFGV TDEQIVRAIR ENGLKTVEEI THYTKAGGGC GECVGELQRL 
LDAELGKAPV CETPLAAAPK KLTNVQRMQL VLKVLEGEIR PRLQQDGGDI ELVDMDGTTV 
YVALRGMCTS CPSSRLTLEG FVEKTLRDHV DENIVVKEAA A