Gene DvMF_2562 details

Gene Information

• Locus tag: DvMF_2562
• ID: 7174498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 3237334
• End bp: 3237930
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643541092
• Product: ThiJ/PfpI domain protein
• Protein accession: YP_002436969
• Protein GI: 218887648
• COG category: [K] Transcription
• COG ID: [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 85
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCACGT ACGGCCTGTA CATCTACGAA CAGGTGGCGG AGCAGGATTT CGTCGGCCCG 
CAACAGGTGT TTGCCGCATC CCGGCACATT TCGGGCGGCA ACGACACCAT CGCGACCATC 
GCCGCGCGGC CCGGACCGCT GCGGGGGGCC AGCGGCCTGC GCATGATCCC CGACCACACC 
TTTGCCGACG CGCCACCGCT GGACGTGCTG GTGCTGCCCG GCACCGCCGA TGTCACCCGC 
CACGCCCTGT CCGACCCCGG CCTGCTGGAA TGGGTGACGG CCCAGGTCGC CACGGCGCGC 
TGGGTGACGG CAGTGTGCAC CGGCACGCTG ATCCTGCACG CGGCGGGCCT GCTGCGCGGG 
CGCAGGGCCA CCACCCACTG GGCCTATGCA GAGGAACTGG GCCGCGACCC GCAACTGACC 
CTGCTGCCGG ACATGCGCTA CGTGCGCGAC GGCAATATCG TCACCTCGCA GGGGGTGTCG 
GCGGGCATAG ACATGGCCCT GTGGCTGGTG GGGCAGATTC ATGACCCGGA CCACGCCCGC 
GCCGTGCGCA GGCTGATCCA GTACGACCCG GCCCCGCCGT ACACGGCGGA AGTGTAG 

 

Protein sequence

MTTYGLYIYE QVAEQDFVGP QQVFAASRHI SGGNDTIATI AARPGPLRGA SGLRMIPDHT 
FADAPPLDVL VLPGTADVTR HALSDPGLLE WVTAQVATAR WVTAVCTGTL ILHAAGLLRG 
RRATTHWAYA EELGRDPQLT LLPDMRYVRD GNIVTSQGVS AGIDMALWLV GQIHDPDHAR 
AVRRLIQYDP APPYTAEV