Gene DvMF_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2548 
Symbol 
ID7174484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3219640 
End bp3222225 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content69% 
IMG OID643541078 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002436955 
Protein GI218887634 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAA TGACCGCCGG GACGGGCGGC ACGACATCCG GTGACAGGGG TCCGGACAAG 
GGCAAGGGGC CGGGCACGGG TTCGGGTGCC GATGCGGGCG CCTCGCCCGG TTCTGCCCAT
GCCGCCCCTG CCGCCCGTAC AGGAAGACCC GGCAAGCCGG GATGGGGCCG ACGCCTGCGC
GGTCTGCCGG GCGGCAGCCT GGCCGCCAAG GTGGTGGCGG CCAGCGGCGC GGCGTTGTTT
CTGGGGGTGC TGGTGCTGTC GCTGGGCAGC ATCCGCTACC AGCGCGAACA CCTGCACGAC
GAGCTGGCCG CCGGGGGCGA CCGCCTGGGC ACCACCATCC GCCTGGGCGC GCGCTTCGCC
ATGATGCTGA ACGCCCGCGA CGAGATCAAC CAGATCATCA GCGACGTGGC CCGCCAGAAG
GACATCGTCT CCATCCGCAT CTACAACAAG GAAGGCGTCA TCAAGTTCTC GGGCGACCCG
GACGAGGTGG AGCGGCGCAC CAACATCCGC GACGAGGCCT GCGCCGCCTG CCATCGCACG
GCGGAACCGC GCAAATGGCT GGCCCTGCGC GAGCGCACCC GCGTGTTCAC CGATCAGGAT
GGCCGCCGCC TGCTGGGCAG CCTTACCCCC ATCATGAACG AGCCCGGCTG TTCGGGCGAG
CCCTGCCACT TCCACCCGGC GGACAAGCTG GTGCTGGGCG CGCTGGAGGT GGTGCTTTCT
TTGCAGGACG CGGAGGCCGA AGTTCTGGCC TTCCAGACCC GGGTGGTCAC CCTGGCGGCA
GCGGTGTTCC TGCTGGGGGC CACGGCGGTG CACCTGTTCC TGCGGCGTTT TCTCACGCGG
CCCGTGGCCC GGCTCATCGA GGGCACCCGC GCAGTGGCGC GCGGCGAGAA GGTGGACCTT
TCCGACGTGC GCCAGCAGGA CGAGATAGGC GAACTGGCCG GGGCCATCAC CCGCATGGAC
CGCGACATCG CCCAGAAGCG GGCGGAACTG AACCGCCAGC GCGACGAGTA CCAGCGGCTG
TTCGACCAGG TGCCCTGCGC CATCACCGTG CAGGACAGGA ACCTGCGGCT GCTGCGTTAC
AACCGCATGT TCCGCGAGAA CTTCACGCCC AGGCCCGGCG ATTTCTGTTT TCAGGCCTAC
AAGGGCCGCA CCGGCAAGTG CCCCAACTGC GCCGTGGAAA TGACCATGCA GACCGGCCTT
GCCCATTGCA GCGAGGAAAG CGGCTTCCAC ACCGACGGCA GCCGGGCGCA CTGGATCGTG
CACACCTCGC CCGTGTTCGA TGCGGAAGGG CGGGTGGCGG CGGCCATGGA AATGACCCTG
GACATCACCG ACCGCAAGGA ACTGGAAGAA AAGCTGCGCC GCTCGGAACT GAAGTACCAC
GCCATCTTCA ACCACATTCC CAGCGCCGTG TTCGTGCTGG ACCAGCAGAC CCTGGAGGTG
GTGGACTGCA ATTCCACGGC GGAAAAGGTG TACGGCTGGC CGCGCGAGGA AATGAAGGGC
CGCTCGTTCC TGGACCTGTT CCCGCCGGAC GAGCGCGAAC GCTACGCCTC GCAGTTGCGG
GCCTTCACCG TGCTGAACCG CGCCCGCAAC GTGGCCCGCG ACGGCAGGCC CTTTCACGTG
GACATCATGC TGTCCCCGGC GGAATACCTG GCCCGGCAGG TGCTGCTGGT GACCACCACC
GACATCACCG AACGGCTGGA GGCCGAGCAG AAGGTCATTC AGGCGGGCAA GATGGCCACC
CTGGGCGAAA TGGCCACGGG CGTTGCCCAC GAACTGAACC AGCCGCTGAC GGTCATCAAG
ACCGCCGGGG GCTTCCTGCT GCGCAAGGTG ACGCGCGGCG AACCCATCGA CCCGGAAATC
CTGGCCACCA TGGCCCGCGA GATCGACGGC CACGTGGACC GGGCCAGCCG CATCATCGGG
CACATGCGCG ACTTTGGCCG CCGCTCGGAC CTGGCGCTGG AGCGGGTGGA CGTGAACGCG
GTGCTGCAAA GCGCCACGGA GTTCTTCAGC CGCCAGCTGT CGCTGCGCGG CATCGACATC
GACTGGCGGC TGGCCGAGCC GCTGCCCCCG GTCATGGCCG TGTCCAACCG GCTGGAGCAG
GTGTTCATCA ACCTGCTGCT CAACGCCCGC GACGCCATAG AGGAGCGCAG CGAGAAGGAA
CCGGGCGCGC CGCGCCGCAT CACCGTGGAA ACGGTGGCCG ACGACCGGCG GGTGACGGCG
CGGGTGTGCG ACACCGGCGG CGGCATACCT CCGGCGCTGC TGCCGCGCAT CTTCGAGCCG
TTCTTCACCA CCAAGAAGGT GGGCAAGGGC ACGGGGCTGG GGCTTTCCAT CAGCTACGGG
CTGGTCAAGG AATTCGGCGG GTCCATCCAG GCGTCCAACA TGGCGGGGGG CGGGGCGTGC
TTCACCCTGA ACTTTCCGGT GACTTCCGGG GGCGTGGGTG CTGCCGGATC GGGGGGGACT
GCGGGCGCAG GGGCCGACGT CCCGGGTAGG GCAGGAGGCG GGGGAGATGC GCCCGCCGCC
GCGCCGGGGC CGGACGGGAC CGCTGACGGC ACCCCCGCCG GGGCTGAGGG AGGAGACGCG
GCATGA
 
Protein sequence
MAAMTAGTGG TTSGDRGPDK GKGPGTGSGA DAGASPGSAH AAPAARTGRP GKPGWGRRLR 
GLPGGSLAAK VVAASGAALF LGVLVLSLGS IRYQREHLHD ELAAGGDRLG TTIRLGARFA
MMLNARDEIN QIISDVARQK DIVSIRIYNK EGVIKFSGDP DEVERRTNIR DEACAACHRT
AEPRKWLALR ERTRVFTDQD GRRLLGSLTP IMNEPGCSGE PCHFHPADKL VLGALEVVLS
LQDAEAEVLA FQTRVVTLAA AVFLLGATAV HLFLRRFLTR PVARLIEGTR AVARGEKVDL
SDVRQQDEIG ELAGAITRMD RDIAQKRAEL NRQRDEYQRL FDQVPCAITV QDRNLRLLRY
NRMFRENFTP RPGDFCFQAY KGRTGKCPNC AVEMTMQTGL AHCSEESGFH TDGSRAHWIV
HTSPVFDAEG RVAAAMEMTL DITDRKELEE KLRRSELKYH AIFNHIPSAV FVLDQQTLEV
VDCNSTAEKV YGWPREEMKG RSFLDLFPPD ERERYASQLR AFTVLNRARN VARDGRPFHV
DIMLSPAEYL ARQVLLVTTT DITERLEAEQ KVIQAGKMAT LGEMATGVAH ELNQPLTVIK
TAGGFLLRKV TRGEPIDPEI LATMAREIDG HVDRASRIIG HMRDFGRRSD LALERVDVNA
VLQSATEFFS RQLSLRGIDI DWRLAEPLPP VMAVSNRLEQ VFINLLLNAR DAIEERSEKE
PGAPRRITVE TVADDRRVTA RVCDTGGGIP PALLPRIFEP FFTTKKVGKG TGLGLSISYG
LVKEFGGSIQ ASNMAGGGAC FTLNFPVTSG GVGAAGSGGT AGAGADVPGR AGGGGDAPAA
APGPDGTADG TPAGAEGGDA A