| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2528 |
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| Symbol | |
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| ID | 7174464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3186814 |
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| End bp | 3188553 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541058 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_002436935 |
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| Protein GI | 218887614 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGCA CGCTGCAAAG CCTGAAACTC AAGGCCCTCT ACGCCATCAG TCAGGTCTTC
GACCGGGCCC TGGACCTGGA ACAGGCCCTC GGAGAGGTTC TGCGCGTGCT TTCGGAAACC
CTTTCCATGA AGCGCGCCAC CATCACCCTG CCCGACCGCG AGACCGGGCA GCTGGTCATC
GCCGCCTCGC ACGGGCTTAC CCCCGAGGAA CGCGGACGGG GCGTGTACCG GCTGGACGAG
GGAGTGACCG GCACCATCTT CCAGACCGCC CGCCCCTACA TCGTGCGCGA CGTGCGCACC
GACCCGCTGT TTCTCGACCG CACCGGCGCG CGCAAGGTGG AAAAGGGCAA GATATCCTTC
CTCGGCGTGC CCATCCTGAA GCAGGGCGCC CCCATCGGCG TGCTGAACGT GGACCGTCTG
TTCAGCGACG ACGTGTCCAC CTCGGAAGAC GTGGAATTCC TGGGCATCGT GGCCACCCTG
GTGGCCCAGT TCCTGAGCCT GAACGAGCAG CTCAACGAGC GGGTGGACAC CCTGCGCCGC
GAAAACGTCA AGCTGCGCAC CCGCGTGCTG GACGAACGGG GCGACTACAT CGTGGGCCGC
AGCGCGGCCA TGCTGGACGT GCAGCGCCAG ATAGAGCGGG TGGCCCCCAC CAGGGCCACT
GTGCTGCTGC TGGGCGAATC GGGCGTGGGC AAGACGCTCA TCGCGCGGCT GCTGCACAAT
CTTTCCGACC GCATGGTCCA CCCCTTCGTG AAGGTGAACT GCGCCTCCAT TCCGGAAACG
CTGCTGGAGG CGGAACTGTT CGGCCACGAG AAGGGCGCGT TCACGGGTGC CGCCGCCGTG
CGGGCGGGCC GCTTCGAGGA AGCCCACCGG GGCACCATCT TTCTGGACGA AATAGGCGAA
CTGCCGCCCG GCATCCAGGC CAAGCTGCTG CGGGTCATCC AGGACCGCGA GTTCGAGCGG
CTGGGCAGCA ACCAGACCCA CCGCGTGGAC GTGCGCATCG TGGCCGCCAC CAACCGCGAT
CTGGCCCTGC TTTCCGAACA GGGGCGCTTT CGTCAGGACC TGTACTACCG GCTGTGCGTG
TTCCCCATCC GGGTGCCCTC GCTACGCGAA CGGCCCGACG ACGTGGAGCG CCTGCTCAAC
CACTTTCTGG CCAAGGCCGC CCGCGACTAC CGCCGGGTGA TCACCCTGGC CCCGGACGCG
CTGGGCCTGC TGCGCCGCCA CGAATGGCCC GGCAACGTGC GCGAGATGGA AAACCTCATC
GAGCGCCTGG CCATCCTGTC CGAATCCGGC CAGATCGACC GGCGCTTCCT GGAGCCGCTG
CTGGAACATT CCGCCACGGA AAACGCCCAG CCCGACTGGC CCTATCCGGT GCATCCGGCA
CAGCAAGCGC ATCAGGCACA TCAGGCCCCC CATGCGCCCC TGCCCGGCGG CATGTCCGGC
AGCATGGCGG GCGGCATGGC GGGCAATACC GCCCCCGGCC ACGGCGCCCC GCACGGGGCC
ACGGCGGCGC ACGATGCGCA TGCGGGCCAC GGCGATGCGG ACCTCCACGG CGATGCACAC
CCCACCACCC TGCGCGACAT CGAGCGCAAC GAAATCATCG CCGCCCTGCG CCGCAACGGC
TGGGTGCAGC ACCGCGCCGC CGCCGCGCTG GGCATCACCC CGCGCCAGAT GGGCTACCGC
ATCCGCAAGA TGGGGCTCTC CGGTCTGGTG GCCGGGGAAC GCGCCCGCCG GGGCGACTGA
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| Protein sequence | MPCTLQSLKL KALYAISQVF DRALDLEQAL GEVLRVLSET LSMKRATITL PDRETGQLVI
AASHGLTPEE RGRGVYRLDE GVTGTIFQTA RPYIVRDVRT DPLFLDRTGA RKVEKGKISF
LGVPILKQGA PIGVLNVDRL FSDDVSTSED VEFLGIVATL VAQFLSLNEQ LNERVDTLRR
ENVKLRTRVL DERGDYIVGR SAAMLDVQRQ IERVAPTRAT VLLLGESGVG KTLIARLLHN
LSDRMVHPFV KVNCASIPET LLEAELFGHE KGAFTGAAAV RAGRFEEAHR GTIFLDEIGE
LPPGIQAKLL RVIQDREFER LGSNQTHRVD VRIVAATNRD LALLSEQGRF RQDLYYRLCV
FPIRVPSLRE RPDDVERLLN HFLAKAARDY RRVITLAPDA LGLLRRHEWP GNVREMENLI
ERLAILSESG QIDRRFLEPL LEHSATENAQ PDWPYPVHPA QQAHQAHQAP HAPLPGGMSG
SMAGGMAGNT APGHGAPHGA TAAHDAHAGH GDADLHGDAH PTTLRDIERN EIIAALRRNG
WVQHRAAAAL GITPRQMGYR IRKMGLSGLV AGERARRGD
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