| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2402 |
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| Symbol | |
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| ID | 7174336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3035450 |
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| End bp | 3037066 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643540932 |
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| Product | nickel ABC transporter, periplasmic nickel-binding protein |
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| Protein accession | YP_002436811 |
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| Protein GI | 218887490 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTCCAC TTCTGCGGTC GATGCTCGCC GCCCTCATGC TGTGTACCGT GACGCTGGCG
GGCGGCCTGG CCGCCCCCCT TGCCGCACGC GCCGCCGACA CCCCGGCGGA TACCCTGCGC
TATTCCTGGC CCTCCAACGT GGGCGAGCTG AATCCGCACA AGTACTCGCC CAACCAGATG
TTCGCCCAGG GCATGGTGTA CGAGCCGCTG GTCAAGTACG CCAAGGGCGG CGCCATGGAA
CCCTGGCTGG CCGAAAGCTG GACCGTGTCG CCCGACGGCA AGACATACAC CTTCACGCTG
CGCAAGGGCG TGACCTTTTC CGACGGCACG CCCTTCGACT CCCGGGCCGT GCGCATGAAC
CTTGAAACGG TGCTGGCCAA CCGCGCCCGC CACGACTGGC TGGAACTGGT GGCCCAGATC
GACAAGGTGG AAACGCCCGA CGCGCGCACC GTGCGCCTTG TGCTGAAGAA CGCCTACTAC
CCCGCGTTGC AGGAACTGGC GCTGATCCGG CCCGTGCGCT TCCTGTCGCC CTCGGCGTTC
CCGCCGTCGG GCAACACCAA CGACGGCATA AAGGCCCCCA TCGGCACCGG CCCGTGGAAG
CTGGTGGAAA CCCGCAAGGG CGAATACGAC GTGTTCGAGC GCAACGACGC GTACTGGGGT
AAAAAGCCCG CCATCAAGCG CATCGTGGTC AAGGTCATCC CCGACCCCAA CACCCGGCTG
GTGGCCCTGC AGGCGGGCGA GCTTGACCTG GTCTTCGGGG GCGGCGGACA CGGCGGCGGC
CAGATCAGCC TGGAAGCCTT CGACGCCCTG AAAAAGGGCG GCAAGTACGC CACCTACCTT
TCGCCGCCGC AGGCCAGCCG GGTCATCGCG CTGAACAGCA AGAGCGGCCC CACCGCCGAC
ATCGCCGTGC GCAAGGCCAT CCTGCACACC ATCAACAAGG ACGCCATGGT CAAGGGCATC
TTCCTGAACG CGGAAGCCCG CGCCGACGCC CTGTTCCCGC CCACGTCCCC CTACTGCGAC
CTGAAGCTGC CCCCCTACGC CCACGACACC GCCAGGGCGG AAGCCCTGCT GGACGAGGCG
GGCTGGAAGC GCACCAATCC CAAGGGCCCG CGCATGAAGG AAGGCAAGCC GCTGACCGTG
GACCTGTGCT TCGTGGGCAA CGACGCCCTG CAAAAGGCCA TCGCGGAATT CCTGCAATCG
GAACTGGCGC GCGTGGGCGT GCAGGCCAAC CTGATCGGCG AGGAAGAAGA CGCCATCGGC
GAACGCCAGA AGAACGGCGC CTTCGGCATG GTCTTCGGCG ACACCTGGGG CGCGCCCTAC
GACCCGCATT CCTTCGTCAG CGGCATGCGC GTGCCCACCC ACGCCGACTA CCAGGCCCAG
CTGGGCCTGC CCATGAAGGC CGACCTCGAC GCCTGGATCG GCAAGGTGCT GGTGACCACC
GACGAAACCG CGCGCCAGAA CCTGTACCGA GACATCCTGA CCACCCTGCA CGACCAGGCC
GTGTACCTGC CGCTGACCTA CCAGACCAGC ATGGTGGTGC ACACCGCCCG CGTGGACGGG
GTGCACTTCG GCGCCATGGA CACGGAAATC CCCTTCGAGG ACATGCGCCT GAAATAG
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| Protein sequence | MRPLLRSMLA ALMLCTVTLA GGLAAPLAAR AADTPADTLR YSWPSNVGEL NPHKYSPNQM
FAQGMVYEPL VKYAKGGAME PWLAESWTVS PDGKTYTFTL RKGVTFSDGT PFDSRAVRMN
LETVLANRAR HDWLELVAQI DKVETPDART VRLVLKNAYY PALQELALIR PVRFLSPSAF
PPSGNTNDGI KAPIGTGPWK LVETRKGEYD VFERNDAYWG KKPAIKRIVV KVIPDPNTRL
VALQAGELDL VFGGGGHGGG QISLEAFDAL KKGGKYATYL SPPQASRVIA LNSKSGPTAD
IAVRKAILHT INKDAMVKGI FLNAEARADA LFPPTSPYCD LKLPPYAHDT ARAEALLDEA
GWKRTNPKGP RMKEGKPLTV DLCFVGNDAL QKAIAEFLQS ELARVGVQAN LIGEEEDAIG
ERQKNGAFGM VFGDTWGAPY DPHSFVSGMR VPTHADYQAQ LGLPMKADLD AWIGKVLVTT
DETARQNLYR DILTTLHDQA VYLPLTYQTS MVVHTARVDG VHFGAMDTEI PFEDMRLK
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