| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2401 |
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| Symbol | |
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| ID | 7174335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3034090 |
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| End bp | 3035031 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540931 |
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| Product | nickel transporter permease NikB |
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| Protein accession | YP_002436810 |
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| Protein GI | 218887489 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT ACATACTGAA ACGCCTTGCC GCCCTCATCC CCCTGCTGCT GCTGGTCTCG
GTGGTGGTCT TCCTGCTGCT GCGCGCCGCC CAGGGCGACC CGGCCATGGC CTACCTGCGC
CTGTCGCGCA TCCCCCCCAC TGACGAGGCC CTGGCCACCG CCCGCCGCAT GCTGGAGCTG
GACCTGCCCC TGTGGGAACA GTACGCCCGC TGGCTGGCCC GCGCCGTCAC CGGCGACTTC
GGCAACTCCT ACGTCACGGG CCGCCCGGTG CTGGGCGAGG TGCTGCACTA CCTGCCCGCC
ACCCTGCAAC TGGCCGGGGC GGCCCTGCTG CTCACCCTGA TCGTCAGCAT CCCCCTGGGG
GTCGGCGCGG CCCTGCACCG CGACCGCCCG CTGGACAACG CGGCCCGCGC CCTGTCCTTC
ACCAGCGTGT CCCTGCCCAA CTTCTGGCTG GGCTTCCTGC TGGTGTGGCT GTTCGCGGTC
AAGCTGGGCT GGCTGCCCGC GCTGGGGCGC GGCGGCCTGG AACACCTGGT GCTGCCCGCC
GTGACCCTGT CGCTGATGTC CATGGGCATC AACACCCGGC TCATCCGCGC CAGCCTGCTG
GAAAACATGC ACGCCCGGCA CATCATGTAT GCGCGGGCGC GCGGCATTTC CGAACGCGGC
GTGGTGTGGC GGCACATGTT CAAGAACTCG CTGATCCCGG TGCTGACCTC GCTCGGCATG
CACGTGGGCG AACTGCTGGG CGGCGCGGTG ATAGTGGAAA CGGTGTTCGC CTGGCCGGGC
GTGGGCCGCT ACGCGGTGTC CGCCGTGTAC AACCGCGACT ATCCCATCCT GCAATGCTTC
ATGCTGCTGA TGACGGCCAT CTTCGTGCTG TGCAACCTGG CCGTGGACAT CCTGTACGCG
TGGGCCGACC CGCGCATCCG GCTGGGGGAG GACCGCGCAT GA
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| Protein sequence | MPAYILKRLA ALIPLLLLVS VVVFLLLRAA QGDPAMAYLR LSRIPPTDEA LATARRMLEL
DLPLWEQYAR WLARAVTGDF GNSYVTGRPV LGEVLHYLPA TLQLAGAALL LTLIVSIPLG
VGAALHRDRP LDNAARALSF TSVSLPNFWL GFLLVWLFAV KLGWLPALGR GGLEHLVLPA
VTLSLMSMGI NTRLIRASLL ENMHARHIMY ARARGISERG VVWRHMFKNS LIPVLTSLGM
HVGELLGGAV IVETVFAWPG VGRYAVSAVY NRDYPILQCF MLLMTAIFVL CNLAVDILYA
WADPRIRLGE DRA
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