Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2373 |
Symbol | |
ID | 7174307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2994337 |
End bp | 2998836 |
Gene Length | 4500 bp |
Protein Length | 1499 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643540903 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002436782 |
Protein GI | 218887461 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG CCCCCGCACC ACCGCCCGAG GGATCGCCCC CCCTCCAACA GCCCGCTGCC GCGCAGGGGG ACGGAACGCG CCTGCGCATC CCCCCGGGCC CTCTGGGCGA CAGCATGCTC GGCTGGGTGC TGCTGGTGGT GCTTGCGGCG GTGGTGGCAA CCAGCGTCAC CCACGTGCTG CGTGAACGCG AACGCCACAT GGACATGGCC CGGCTGCGGC TGGAGGGGCA ACTGCGACTG ATGGGCGAGC ACGTGGGCGG GCTGCTCCAG ACCATGGACC TCACGCTGGC GGCCCTGGCC TTCGACATGT CCGGCAGCGT GCCCGACCAC GCCTCCCCCG CCCCACCCGC GCTCGACGCC ATGCTGCGCC AGCGGCTGGA CCTGCTGCGT CCCAATGCAC TGGAACTGGC CCTGCTCGCC CCCGACGGGC AGGTGCTTAC CGCCACCGGA CCACTGCCCG CCGCCGCCAT CCCCCAGTTG CTCCGCGTGG TGCTGCCCGC CCACCGCGAC CTGCTGCGCG ACTTCAACCT GCTGCGGGTG CAGTCGCCGC TCACGGGGTT GCAAGGCAAT ACGCCGCCCC GGATGCTGAT GAGCCGCCGC ATCTCCGGGC CGGACGGCAG CTTTGCCGGA GTGGTGGTGG CCCTGGTCAA TCCGGTATCC TTCCACGACC GCTACCAGGA CTACGACCCC GACGAAGCGG AATGCTCCGC GTTGCTCGAC GAGGACACCT CCCCCCTGGT GGTCTGGCCG CCCGGCGCAA ACGCGGCCTG TGTGCGCGCC TCGGTGGCTG CGGCCAGCGG GGCCTGGCCG GAAGACGTGC CCGATGCCAG GCCCGACGCG CCGCCCGGCA GCGTACGGGG CGCACCGCAG GGCACGTCGG GGGACGGCTC CGCCCCTTCT CCCGCCCTGC CCCCGGAAGC ATCGCCATCC TTGGACGGCA CCTCCTTCGA CGACATGCCC GACAAGGGCA TCGGCGTTTC CGGCCTGCGC ATCGTCGAAA CGGACGACGC GCTGGTGGCG GTGCACCAAC TGCGCGATTT TCCGTTCCGC ATGACCATGC ACACCCCGCT GGACCTGGTG CTGTCCGGAT GGCGCAGGCA GACGATGGCC AACGTGGGCA TGACCCTGAC CCTGTGCATG GCCGTCTCGC TGCTGGCCTG GTCGGCCAGC CGCCAGCGCG GCCAGCGGCT GGAGGCGGAG ACCGCGCTGC GCCGCAGCGA GGCCCGCTAC CGCACCCTGG CCGAAAACTA CCCTGGCGGC GCCATCATGC TCTTTGACGG GGACATGCGC TGCCTGCTGG CCGACGGGCT GGGGCTGGCC GGGCTGCTGG CGCCACGCCA ACGGATAGAG GGCGCCATCC CCTCCGACGT GCTGCCCCCG CAGGTGGCGC TGCCCTTCGA GGAACAGTTG CAACTGGCGC TGGCGGGCAC CGAGGTCACC TTCACCATGG CCGTGGGCGA ACGCATCCAC GAGGTGCGCC TGCGCCCCCT GCACGAAGAC CGCGAAACCG GCATGCCCGC CCGGTGCATG TCCGTGCTGC AGGACATCAC CCAGCGCGAG GCGGCCCGCA TGGCCCTGCG CCACAGCGAG GCCCGCCTGC AGGAGGCGCA GCAGATCGCC CGCATGGGCA GCTTCGAACT GCACATGGAC ACCGGGGCGT TCGTGTGGTC CGCCGGGCTG TACGAGATGC TCGGCCACGA CCCCGCGCTG CCCCCCCCGC CCCCGGCGGA GGTATTCGCC ATCCACGCGC CGGAAGAACT GGACTGGTAC CACGAGCACG TGGCCATCAT GTCGGACGAG CCGGTGACCG AACTGCAACG CGTCTTTCCC TACCGCACCC TGGGGGGGCG GCAGGGCTGG GGGCAATTCC GCTGCCGGGT GGCGCGCGGG CCGGATCGCC TGCCCCTGCA CGCGCAGGGC ACCTTTCAGG ACATTACCAG CCTGCGCGAG GCGGAACTGG CCCTGCGCGA CAGCGAGGCG CGGCTCAACG AGGCGCAGTT CATCGCCCGC ATGGGCAGCT ATTCCGTCAA CCTGCGCGAC GGCGAGGCCT TCTGGTCACC GGGGTTGTTC CGCCTGCTGG ACCTGGACCC GCACGACGGC CCGCTGGTGC CCGGCGAGGC CTTCCGCCGC CACGCCCCGG AAGCCGCCCC GTGGTTCGAG GCGTTCCTGG CCACCCCGGC GGACAGGCCG GAATCCACGG AGCGGCGCTC GTTCCCCTAC ATCACCGCCA CCGGGCGGCG CGGCTTCGGC CGCCTGCACA TGATGGCCCG CCACGGCGCG GACGGCCTGC CCGAGCACAT CCGGGGCACC TTTCAGGACA TCACCCCCCT GCACGAGGCG GAGCAGGCCC TGCGCGAGAG CGAGGCCCGG TTGCAGGAAG CGCAGCAGAT CGCGCGCATG GGCAGCTTCG ACCTGGACCT GGTGCACGAC CGGGCCGACT ACTGGTCGCC CGGCCTGTAC GCCCTGCTGG AGCTGGATCC GTCACAGCCC CCGCCGCCGC CCTCTCGGGG CAGCGCCATC CATTCGCCGG AGCGCGTCGG CTGGTTCGAC GAGTTGCGAA CCTCGCGCGT CCCCGTGCCG GAAACCGTCC ACTCGGAGAC CGTGCCCTAC TTCACGGCCA GCGGTCGGAA GGGCGTGGGG CACATGCAGG CTGTGGTGCA GCGCGGCCCG GACGGCACAC CGGTACGCAT GCGCGGCACC TTTCAGGACA TCACCCGCCT GCACCAGACG GAACAGGCCC TGCGCGACAG CGAGGCCCGG CTGCTGGAGG CCCAGCTTAT CGCGGGGATC GGCAGCTTCG ACTTCGACAT CGCCAACGAT GTGGCCACCT ACTGGTCAAC GGGGTTGTAC GCCCTGCTCG AGGTGGAGCC CGGCACGCCG CTGCCCCGCC CGCTGGAAGG CTGCCATATC TACGCCCCGG ACTACGCCGC GCAGTTCGAA CGGATGATTA CCGAACCCGC CGACGAACCG GAATCCGTCT TCTGGGACAA CATCCCCCTG CGCACGGCCA AGGGGCGGCG GATGATGGGC CAGATGAAGG CCGTGGTGCA GCGCGGACCG GACGGCAGGC CGGTGCGGGC ACGCGGCGCC TTCCAGGACA TCAGCCGCCT GTACGAGGCG GAACAGGCCC TGCAACGGGC CAAGGAAGAA GCCGAAAGCG CCAACGAACT CAAGAGCCAG TTCGTGGCCA ACATCAGCCA TGAAATGCGC ACCCCGCTTT CGGGCATCCT GGGCATCGTG GACGTGGCGC TTTCACGCCT GAACGACACG GCGCTCCCCG CCCACGACAA CGAGCAGGGC CACTACCTTT CCATGATCCG CAACGTGTCA GAGGGGCTGC TGCACGTGAT CAACGATCTG CTGGACTTTT CGCGCATGGA GGCCGGACGG CTGGGGCTGG ACCAGGTGGA GTACGACCTG CGGGCCGCCG TGAGCGATGC GCTGGCGCCG CTGGCCGTGC AGGCGGAGCG CAAGGGGCTG TCGCTTACCG TGCACATCGA CGCGGACGTA CCCGCCCGGT TGCAGGGCGA CCCGTTGCGG CTACGCCAGA TTCTGGTGAA CCTGGCGGGC AACGCCGTGA AGTTCACCGA CACCGACACC GGCAGCGTGC ACGTGGACGT GCGCCGCAGC GCCCAGTGCC CCCGGCCCGG CGGCTGCCTG CGCTTCACCG TGCAGGACAC CGGGCCAGGC ATCACGGCGG ACAAGCTGCC CCTGCTGTTC GAAAGCTTCT CGCAGGCGGA CGGGTCGCAT ACCCGGCGGC ACAGCGGCAG CGGCCTGGGC CTTGCCATCT CGCGACACAT CGTGCGCTTG CAGGGCGGTG ACATCGGCGT GAACAGCACG CCCGGCCAGG GCAGCCGGTT CTGGTTCACC CTGCCCATCG ACAAGGACGC GCCGCAGGGC GCCGCCACCC CCACCGACCT GCGCCTGACC AGCCCGAACC CGGCGGACAG TCCGGATTCA CCGGAGGTGC CGGGACACTG GGGACCGGCA AAACCGGCGG AACCGGGCGC GCAGGAAGCA GGCCGCCCCC TGTGCGTGCT GCTGGCGGAA GACAACGACC TGAACCGCGA ATTCCTGAGC TTCTTCCTGC AGGAACGCGG CTACGAGGTG CACCTGGCCA TCGACGGGCA GGAGGCCCTG GACCGCCTGC GCGGGGGCTG CACCCCCGAC AGCGGGATCG GCGGAATGCA ACGTCCCCCC TTCGACGTGG TGCTGATGGA CGTGCAGATG CCGGTGGTCA GCGGGCTGGA AGCCACCCGC CGCATCCGCG AGGCGGCGGC GCAAGGGGCG GCCTGGGCCG ACGTGCCGGT CATCGCCCTG ACCGCCCACG CCATGCAGGG CGACCGCGAC CGCTTCCTGG CAGAGGGCAT GGACGACTTC GTGGCCAAGC CGGTGAACCG CGAGGCCCTG TTCGCGGCCA TCGAACGGCA GGTGGCCCGT TACCGCGAAA AACGAGGGGC CACGGGCCAC GGCACGGGCG GCACCACGGG GGCAGCATAG
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Protein sequence | MADAPAPPPE GSPPLQQPAA AQGDGTRLRI PPGPLGDSML GWVLLVVLAA VVATSVTHVL RERERHMDMA RLRLEGQLRL MGEHVGGLLQ TMDLTLAALA FDMSGSVPDH ASPAPPALDA MLRQRLDLLR PNALELALLA PDGQVLTATG PLPAAAIPQL LRVVLPAHRD LLRDFNLLRV QSPLTGLQGN TPPRMLMSRR ISGPDGSFAG VVVALVNPVS FHDRYQDYDP DEAECSALLD EDTSPLVVWP PGANAACVRA SVAAASGAWP EDVPDARPDA PPGSVRGAPQ GTSGDGSAPS PALPPEASPS LDGTSFDDMP DKGIGVSGLR IVETDDALVA VHQLRDFPFR MTMHTPLDLV LSGWRRQTMA NVGMTLTLCM AVSLLAWSAS RQRGQRLEAE TALRRSEARY RTLAENYPGG AIMLFDGDMR CLLADGLGLA GLLAPRQRIE GAIPSDVLPP QVALPFEEQL QLALAGTEVT FTMAVGERIH EVRLRPLHED RETGMPARCM SVLQDITQRE AARMALRHSE ARLQEAQQIA RMGSFELHMD TGAFVWSAGL YEMLGHDPAL PPPPPAEVFA IHAPEELDWY HEHVAIMSDE PVTELQRVFP YRTLGGRQGW GQFRCRVARG PDRLPLHAQG TFQDITSLRE AELALRDSEA RLNEAQFIAR MGSYSVNLRD GEAFWSPGLF RLLDLDPHDG PLVPGEAFRR HAPEAAPWFE AFLATPADRP ESTERRSFPY ITATGRRGFG RLHMMARHGA DGLPEHIRGT FQDITPLHEA EQALRESEAR LQEAQQIARM GSFDLDLVHD RADYWSPGLY ALLELDPSQP PPPPSRGSAI HSPERVGWFD ELRTSRVPVP ETVHSETVPY FTASGRKGVG HMQAVVQRGP DGTPVRMRGT FQDITRLHQT EQALRDSEAR LLEAQLIAGI GSFDFDIAND VATYWSTGLY ALLEVEPGTP LPRPLEGCHI YAPDYAAQFE RMITEPADEP ESVFWDNIPL RTAKGRRMMG QMKAVVQRGP DGRPVRARGA FQDISRLYEA EQALQRAKEE AESANELKSQ FVANISHEMR TPLSGILGIV DVALSRLNDT ALPAHDNEQG HYLSMIRNVS EGLLHVINDL LDFSRMEAGR LGLDQVEYDL RAAVSDALAP LAVQAERKGL SLTVHIDADV PARLQGDPLR LRQILVNLAG NAVKFTDTDT GSVHVDVRRS AQCPRPGGCL RFTVQDTGPG ITADKLPLLF ESFSQADGSH TRRHSGSGLG LAISRHIVRL QGGDIGVNST PGQGSRFWFT LPIDKDAPQG AATPTDLRLT SPNPADSPDS PEVPGHWGPA KPAEPGAQEA GRPLCVLLAE DNDLNREFLS FFLQERGYEV HLAIDGQEAL DRLRGGCTPD SGIGGMQRPP FDVVLMDVQM PVVSGLEATR RIREAAAQGA AWADVPVIAL TAHAMQGDRD RFLAEGMDDF VAKPVNREAL FAAIERQVAR YREKRGATGH GTGGTTGAA
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