Gene DvMF_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2308 
Symbol 
ID7174241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2901848 
End bp2902849 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID643540837 
ProductKpsF/GutQ family protein 
Protein accessionYP_002436717 
Protein GI218887396 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT GCACCTGCGG CGAACGCCGC ACAGACTGGA TACCCCTCGG GCGCGACGTG 
CTCGATATCG AAATAGAAGG CCTGACGGCG CTACGCGACA GGCTTGGCCC CTCGTTCGAG
GCGGCGTTGG CGCTGCTGGC GGGCTGCCGG GGCCGCGTGG TGGTCACCGG GCTTGGCAAG
TCGGGTCTGG TGGGCCGCAA GCTGGCCGCC ACCCTGTCCT CCACCGGCAC CCCGGCGTTC
TTCCTGCACC CGGTGGAAGG CGCGCATGGC GACATGGGCA GCCTGCGGGC GGAGGACGTG
GTCATCGCCA TCTCCAATTC CGGCGAGACG GACGAACTGA ACGCCATTCT GCCCAGCCTG
CGGGCCATTG GCACCTCCAT TATCGCCATG ACCGGCAAGG CGCAGTCCAC ACTGGGCCGC
GCCGCCGACG TGGTGCTGGA TTCCGGCGTC CCGCGAGAGG CGTGCCCCCA CAACCTGGCC
CCCACGGCAT CCACCACGGC GGTGCTGGCC CTTGGCGACG CTTTGGCGGT GTGCCTCATC
CATTGGAAAT CGTTTACGGA AAACGACTTT CTGCGCTACC ACCCCGGCGG TTCGCTGGGC
CAGCGGTTGC GCCTGCGCGT GCAGGAGCTG ATGCACACCA CCGGCATTCC CGTGACCCAG
GACGACGTGG GCCAGGAAGA GGCCGTGCGC GTGCTGGACA AGGGCGGCTT TGGCGCGGTG
GCCGTGGTGG ACGGCAGCGG CAGGCTGATG GGGATACTTA CCGACGGCGA CGTGCGCCGC
GCGGTGATCC GGGGCGACTA TGCCCCGCGC ACCCCGGTGA CGGCCATCAT GACCTGCAAC
CCGCGCAGCG CCCGCAGTGA CCAGTCGGTG GCGGAACTGC TGGACATCAT GGAGCAGAAG
GCCATCACCG TGCTGCCCAT CGTGGACGAC GCGCACCGCC TGCTGGGCCT CATCCACCTG
CACGACCTGC TGGGCAAGGG CGGCGTGAGC TTTGCCGGGT AG
 
Protein sequence
MSDCTCGERR TDWIPLGRDV LDIEIEGLTA LRDRLGPSFE AALALLAGCR GRVVVTGLGK 
SGLVGRKLAA TLSSTGTPAF FLHPVEGAHG DMGSLRAEDV VIAISNSGET DELNAILPSL
RAIGTSIIAM TGKAQSTLGR AADVVLDSGV PREACPHNLA PTASTTAVLA LGDALAVCLI
HWKSFTENDF LRYHPGGSLG QRLRLRVQEL MHTTGIPVTQ DDVGQEEAVR VLDKGGFGAV
AVVDGSGRLM GILTDGDVRR AVIRGDYAPR TPVTAIMTCN PRSARSDQSV AELLDIMEQK
AITVLPIVDD AHRLLGLIHL HDLLGKGGVS FAG