| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2247 |
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| Symbol | |
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| ID | 7174180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2821288 |
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| End bp | 2821935 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643540778 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_002436658 |
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| Protein GI | 218887337 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 0.528466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGTCCA GCCTGCGCGA CCCGATCAGC GGCCTTACCC ACTGCATAGG CGCGCTGCTG
GCCGTGCTGG GCACGGTGCT GCTGCTGGTG CGCGCGGCAT CGCCCCTGCT GCCGTGGCAC
GTGGTTACCT TTTCCGTCTT CGGGGTGTCC ATGGTGCTGC TGTACACGGC CAGCACCCTG
TACCACTGGC TGCCCCTGCC GGAACGGGGC GTGCGCCTGA TGCGCCGCGT GGACCATTCC
ATGATCTTCG TCTACATCGC GGCCACCTAC ACGCCCATCT GCCTCATCCC GCTGCGCGGG
CCGTGGGGCT GGTCGCTGTT CGGCTGCGTA TGGGCGGTGG CCGTGGCGGG CATCTTCACC
AAGGTGTTCT GGCTGCACGC GCCGCGCTGG GTGTCCACGG GCATCTACCT GGGCATGGGC
TGGATGGCGC TGGCGGGCAT CTACCCGCTG GTCATGAACC TGCAAGCCGG GGCGCTGGCC
TGGCTGGTGG CGGGCGGCGC TTTCTATTCG GCGGGCGCGG TGATCTACGC GCTGAAGCGC
CCCAACCGCT TCCGGCACTT CGGCTTCCAC GAGATATTCC ACCTGTTCGT GATGGCGGGC
AGCTTCTGCC ACTTCGTGGT CATGTATTCC TACGTCAGCG TGCTGTAG
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| Protein sequence | MVSSLRDPIS GLTHCIGALL AVLGTVLLLV RAASPLLPWH VVTFSVFGVS MVLLYTASTL
YHWLPLPERG VRLMRRVDHS MIFVYIAATY TPICLIPLRG PWGWSLFGCV WAVAVAGIFT
KVFWLHAPRW VSTGIYLGMG WMALAGIYPL VMNLQAGALA WLVAGGAFYS AGAVIYALKR
PNRFRHFGFH EIFHLFVMAG SFCHFVVMYS YVSVL
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