Gene DvMF_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2219 
Symbol 
ID7174146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2779206 
End bp2779823 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content68% 
IMG OID643540744 
Productnuclease (SNase domain protein) 
Protein accessionYP_002436630 
Protein GI218887309 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCC GCCCCGGCTC GCTGCTGGGG CTGCTGCTGG CGTTGGCCCT GTGGACCCTG 
GCGGGGCTTG AGCCATGGCA GGGGCTGGTG GTCGGCGTGC CTGACGGCGA CACCATCGTT 
GTGCGCGATG AGCGCGGGCA TGACGTGCGG GTGCGCCTGT ACGGCATCGA CGCGCCGGAA 
TTGCGCCAGC GCGGGGGCGA GCAAGCCCGC GACAAGCTGC TGCGCATTGT CATGGACCGC 
AAGGTATACC TTGTGACCAT CGACCGCGAC GTCTACGGGC GCGACGTGGC CCACGTGCGC 
ACCAGTCCGT TCCCCTGGAT GGCGACCGTG GTTTCTCCCG GCGTGGCCCC GAGAGCCGCA 
ACCACGCCTG CCTCGCGGCA GGATGCACGA GCCACAGTGG GTACCGCCGG TGATGGACTT 
CCGCCCGAAC TTACCGATGA TGTGAACGGT GACCTGCTGC GGGCCGGACA AGCTTGGTTC 
TACGGCGAAT ACTGCCGCCT GCCCTATCCC TGCCTTGCCT GGTATTTTGC CGCAGGCAAG 
GCCCGGGAGA CCAACATCGG ACTTTGGAGG GCCCGCAATC CGACCCCGCC GTGGGAATGG 
CGGCGGAAGA ACCGGTAG
 
Protein sequence
MLARPGSLLG LLLALALWTL AGLEPWQGLV VGVPDGDTIV VRDERGHDVR VRLYGIDAPE 
LRQRGGEQAR DKLLRIVMDR KVYLVTIDRD VYGRDVAHVR TSPFPWMATV VSPGVAPRAA 
TTPASRQDAR ATVGTAGDGL PPELTDDVNG DLLRAGQAWF YGEYCRLPYP CLAWYFAAGK 
ARETNIGLWR ARNPTPPWEW RRKNR