| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2162 |
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| Symbol | |
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| ID | 7174084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2695124 |
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| End bp | 2696593 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643540682 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002436573 |
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| Protein GI | 218887252 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCAA CGGCCATGCT GGCGGCCACG CTGGCCGGGT GCTCCTTCGG CCCCGACCAC
GCCCGCCCCG CCATGGACCT GCCCGACGCC TGGCGCCCGG GCACGGCGGA CACGGGCACC
GTGCAGGACG GCTGGTGGAA GGGCTTCGGC GATCCGGCAC TGGATGCCCT GGTGGCCTCG
GCGCTGGACC ACAACCGCGA CCTGGCCAAG GCCATCGCCA ACGTGGACGA GGCCCGCGCC
CAGCTGGGCC TTGCCCGGGC CAACCAGATG CCCCGGGTCG ACGCGCAGGG CGCATCGCAG
CGCCAGCGCT ATTCGCTGGA GGGCTTCAAC TCGTTCGATG AATCCACCCG CGTGCAGGAC
CTGCACAACG CGGGCGGCGT CCTGTCCTAC GAAATGGACC TGTGGGGCCG CTACCGCCGC
GCCAGCGAGG CGGCGCGGGC CGACCTGCTG TCCACCATGG CCGCGCGCGA CACCGTGCGT
CTGGCCCTGA CCGCGCAGGT GGCCCGCACC TACTTCGACC TGCGCGCCTA CGACCAGCAG
TTGCAGGTGG CCCGCGACAC GCTGGCCTCG CGCGAATCCA CGCAGGAACT GCGCAAGGTG
CGCTTCGAAC TGGGCCTGAC CAGTGAACTC GACTATCGCC AGGCCATCGC AGAAGCGGCT
GCCGCCCGGT CCACCGTGCA CACCCTGCAA TACAACGTGT CCGCCAGCGA GGCGGCACTG
GGCGTGCTTA CCGGCAAAAG CCCGCGCGAC ATCGTGACCG GCACCGTGGA GCGCGGCCTG
GCCGTGGACG CCGTACCCGT GCCCCCCAGC GTGCCCGCCG GATTGCCTTC GGCCCTGCTG
GAACGCCGCC CGGACATCGT CCAGGCCGAA CAGCAACTGG CGGCGGCCAG CGCCAATATC
GGCGTGGCCA AGGCGGCGTA CTTCCCGTCC ATCTCGCTGA CCGGGCTGCT GGGGTATGAA
AGCAGCGACC TCACCCGGCT GTTCACCGGC CCTGCGGGCA CCTGGCGGTA CGCGGGCAGC
GTGTCCATGC CCATCTTCGA CTTTGGCCGG ATCAAGGCCG GGGTTGAAGC GGCAGAGGCA
CGCCAGCGCG CCGCCCTGGC CGGGTACGAA AAGGCCGTGC AGGACGCCTT CCGCGAGGCG
CAGGACGCCC TGGTGGCCAA CCGCAAGGCG CGCGGCGTGG TGGAAGCGCA GACTACCCAG
GTCACCGCGC TGCGCCGTTC GCTGCATCTG GCCAAGTTGC GCTACGACAA CGGCTATTCC
AGTTACCTCG AGGTGCTGGA CGCGGAACGC AGCCTGTTCG ACGTGGAGAT ATCCCTGGCC
TCGGCCCAGC GTGACCAACT GGTGGCCGTG GTCGAGGTGT ACCGCGCCCT TGGCGGCGGC
TGGGCGGGCA TTGCCCCGCT GGCCCCAAAT GCCGCAGACG CTCCCGAAGC CCCGGCTCAG
GACGGCAAGC CGGTGGCGGC CGCGCAATGA
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| Protein sequence | MLATAMLAAT LAGCSFGPDH ARPAMDLPDA WRPGTADTGT VQDGWWKGFG DPALDALVAS
ALDHNRDLAK AIANVDEARA QLGLARANQM PRVDAQGASQ RQRYSLEGFN SFDESTRVQD
LHNAGGVLSY EMDLWGRYRR ASEAARADLL STMAARDTVR LALTAQVART YFDLRAYDQQ
LQVARDTLAS RESTQELRKV RFELGLTSEL DYRQAIAEAA AARSTVHTLQ YNVSASEAAL
GVLTGKSPRD IVTGTVERGL AVDAVPVPPS VPAGLPSALL ERRPDIVQAE QQLAAASANI
GVAKAAYFPS ISLTGLLGYE SSDLTRLFTG PAGTWRYAGS VSMPIFDFGR IKAGVEAAEA
RQRAALAGYE KAVQDAFREA QDALVANRKA RGVVEAQTTQ VTALRRSLHL AKLRYDNGYS
SYLEVLDAER SLFDVEISLA SAQRDQLVAV VEVYRALGGG WAGIAPLAPN AADAPEAPAQ
DGKPVAAAQ
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